RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 EPHA5P54756 1037 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 SULT2A1Q06520 285 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 DGKKQ5KSL6 1271 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 FAM219BQ5XKK7 198 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 RETSATQ6NUM9 610 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 CMTM8Q8IZV2 173 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 PQLC1Q8N2U9 271 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 ELMOD1Q8N336 334 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 FAM81AQ8TBF8 368 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 SPPL3Q8TCT6 385 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 ACDQ96AP0 544 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 CCDC126Q96EE4 140 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 MYO19Q96H55 970 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 RAD9AQ99638 391 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 SLC30A3Q99726 388 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 ZNF385DQ9H6B1 395 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 MAGEE1Q9HCI5 957 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 ABCB8Q9NUT2 735 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 HACD3Q9P035 362 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 LZTS1Q9Y250 596 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 DENND4CQ5VZ89 1909 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 SLCO1B7G3V0H7 640 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 UBFD1O14562 309 aaKnown RBP10.65□□□□□ -0.7
CLIP1-210ENST00000538120 HTRA2O43464 458 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-210ENST00000538120 NDUFS3O75489 264 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 RHOBTB1O94844 696 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 MTHFD2P13995 350 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 CA5AP35218 305 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 CSNK1DP48730 415 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 TRPC1P48995 793 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 NUDT2P50583 147 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 NFKB2Q00653 900 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 FPGSQ05932 587 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 SIM2Q14190 667 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-210ENST00000538120 CDKN3Q16667 212 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 UNC50Q53HI1 259 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 CTSL3PQ5NE16 218 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 SH2D4BQ5SQS7 431 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 ARMC12Q5T9G4 340 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 PAQR3Q6TCH7 311 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 LYSMD3Q7Z3D4 306 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 POF1BQ8WVV4 589 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 L3HYPDHQ96EM0 354 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 HIC2Q96JB3 615 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 MAELQ96JY0 434 aaKnown RBP10.65□□□□□ -0.7
CLIP1-210ENST00000538120 ATOH8Q96SQ7 321 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 GRIP2Q9C0E4 1043 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 TNKS2Q9H2K2 1166 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 PREBQ9HCU5 417 aa10.65□□□□□ -0.7
CLIP1-210ENST00000538120 OAS3Q9Y6K5 1087 aaKnown RBP10.65□□□□□ -0.7
CLIP1-210ENST00000538120 A0A1B0GTW7 788 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 GPR39O43194 453 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 SRP72O76094 671 aaKnown RBP10.64□□□□□ -0.71
CLIP1-210ENST00000538120 PENKP01210 267 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-210ENST00000538120 ASLP04424 464 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 XRCC1P18887 633 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-210ENST00000538120 HLA-FP30511 346 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 CTNNB1P35222 781 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 THOP1P52888 689 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 PKNOX1P55347 436 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 TEAD2Q15562 447 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 PTPRNQ16849 979 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 NADK2Q4G0N4 442 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 CCDC92Q53HC0 331 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-210ENST00000538120 ZNF678Q5SXM1 525 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 IYDQ6PHW0 289 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 ZSWIM9Q86XI8 627 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 TMEM25Q86YD3 366 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 SLC22A9Q8IVM8 553 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 IQCF2Q8IXL9 164 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 LILRA2Q8N149 483 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 CPSF7Q8N684 471 aaKnown RBP10.64□□□□□ -0.71
CLIP1-210ENST00000538120 USP13Q92995 863 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-210ENST00000538120 CNBD2Q96M20 576 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 TFB2MQ9H5Q4 396 aaKnown RBP10.64□□□□□ -0.71
CLIP1-210ENST00000538120 DDX18Q9NVP1 670 aaKnown RBP10.64□□□□□ -0.71
CLIP1-210ENST00000538120 FAM50BQ9Y247 325 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 KIAA0100Q14667 2235 aaKnown RBP10.64□□□□□ -0.71
CLIP1-210ENST00000538120 CCDC160A6NGH7 325 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 STX16-NPEPL1H3BU86 382 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 SDHDO14521 159 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 GAPDHSO14556 408 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-210ENST00000538120 HNRNPRO43390 633 aaKnown RBP10.64□□□□□ -0.71
CLIP1-210ENST00000538120 ARHGEF15O94989 841 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 IRS1P35568 1242 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 HMGCLP35914 325 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 STK19P49842 368 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-210ENST00000538120 MYBPC1Q00872 1141 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 MS4A2Q01362 244 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 CAMK1Q14012 370 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 ZRANB3Q5FWF4 1079 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 PITRM1Q5JRX3 1037 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 C6orf52Q5T4I8 152 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 TMEM198Q66K66 360 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 CUZD1Q86UP6 607 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 SNX32Q86XE0 403 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 ANKRD13BQ86YJ7 626 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 RYBPQ8N488 228 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-210ENST00000538120 RHEBL1Q8TAI7 183 aa10.64□□□□□ -0.71
CLIP1-210ENST00000538120 RPL10LQ96L21 214 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms