RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 DDX18Q9NVP1 670 aaKnown RBP8.62□□□□□ -1.03
UBE3B-208ENST00000538070 UBAP1Q9NZ09 502 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 PDP2Q9P2J9 529 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 LZTS1Q9Y250 596 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 POLR3HQ9Y535 204 aaPredicted RBP8.62□□□□□ -1.03
UBE3B-208ENST00000538070 TRPM7Q96QT4 1865 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 ILVBLA1L0T0 632 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 SYCE1LA8MT33 242 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 CCL16O15467 120 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 ATP6V1B2P21281 511 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 GSTT1P30711 240 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 HK3P52790 923 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 MAPK10P53779 464 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 CDH15P55291 814 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 MTPNP58546 118 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 ZIK1Q3SY52 487 aaPredicted RBP8.62□□□□□ -1.03
UBE3B-208ENST00000538070 ZBTB46Q86UZ6 589 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 CACUL1Q86Y37 369 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 SLC22A17Q8WUG5 538 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 SPATA17Q96L03 361 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 EFHD1Q9BUP0 239 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 MTG2Q9H4K7 406 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 ZFYVE1Q9HBF4 777 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 PDFQ9HBH1 243 aa8.62□□□□□ -1.03
UBE3B-208ENST00000538070 KANSL1LA0AUZ9 987 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 TRIM24O15164 1050 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 AXIN1O15169 862 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 HOXA2O43364 376 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 KERAO60938 352 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 LRATO95237 230 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 CLPTM1O96005 669 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 UGT2B4P06133 528 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 EFNA1P20827 205 aaPredicted RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 RPL38P63173 70 aaKnown RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 ZXDBP98169 803 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 LAMB3Q13751 1172 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 LRP8Q14114 963 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 TMEM259Q4ZIN3 620 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 ATP6AP1LQ52LC2 224 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 CTSL3PQ5NE16 218 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 CXorf57Q6NSI4 855 aaKnown RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 NKAPQ8N5F7 415 aaKnown RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 OR56A4Q8NGH8 313 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 LKAAEAR1Q8TD35 194 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 MRPS31Q92665 395 aaKnown RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 KIAA1191Q96A73 305 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 ZNF558Q96NG5 402 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 SPATS2LQ9NUQ6 558 aaKnown RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 INTS7Q9NVH2 962 aaKnown RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 C6orf203Q9P0P8 240 aaPredicted RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 ZNF711Q9Y462 761 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 PRSS21Q9Y6M0 314 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 MYLKQ15746 1914 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 MYOFQ9NZM1 2061 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 PABPN1LA6NDY0 278 aaKnown RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 NME4O00746 187 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 PRMT5O14744 637 aaPredicted RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 IGLV3-27P01718 113 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 CYBBP04839 570 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 GSNP06396 782 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 PAX3P23760 479 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 TGFBIQ15582 683 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 CHRNA6Q15825 494 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 PAGE3Q5JUK9 113 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 ADGRG2Q8IZP9 1017 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 PELI3Q8N2H9 469 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 SORCS1Q8WY21 1168 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 RNF145Q96MT1 663 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 BIRC8Q96P09 236 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 NR1H4Q96RI1 486 aaPredicted RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 KCTD14Q9BQ13 255 aaPredicted RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 THUMPD3Q9BV44 507 aaKnown RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 IPPKQ9H8X2 491 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 MRPL17Q9NRX2 175 aaKnown RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 FARSBQ9NSD9 589 aaKnown RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 ABCB8Q9NUT2 735 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 LSM7Q9UK45 103 aaKnown RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 GREB1Q4ZG55 1949 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 hCG_2014768A0A024R1R8 64 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 H3BNC9 293 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 LIN7AO14910 233 aaPredicted RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 LRG1P02750 347 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 OGNP20774 298 aaKnown RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 GPX3P22352 226 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 CD70P32970 193 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 HK2P52789 917 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 COL9A2Q14055 689 aaPredicted RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 ZNF648Q5T619 568 aaPredicted RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 SLC22A15Q8IZD6 547 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 OFCC1Q8IZS5 231 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 ZNF786Q8N393 782 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 CBR4Q8N4T8 237 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 CD200R1Q8TD46 325 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 NCLNQ969V3 563 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 PHF12Q96QT6 1004 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 TRIB3Q96RU7 358 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 TRMOQ9BU70 441 aa8.61□□□□□ -1.03
UBE3B-208ENST00000538070 TFB2MQ9H5Q4 396 aaKnown RBP8.61□□□□□ -1.03
UBE3B-208ENST00000538070 HCFC1R1Q9NWW0 138 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms