RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 APOC4-APOC2K7ER74 178 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 BBOX1O75936 387 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 APOC2P02655 101 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 IRF1P10914 325 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 IL7RP16871 459 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 S100GP29377 79 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 CYP2C18P33260 490 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ZYG11AQ6WRX3 759 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 MTSS1LQ765P7 747 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF548Q8NEK5 533 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ARAP3Q8WWN8 1544 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ORAI2Q96SN7 254 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 C14orf119Q9NWQ9 140 aa5.63□□□□□ -1.51
CSMD1-215ENST00000537824 PIN4Q9Y237 131 aaKnown RBP5.63□□□□□ -1.51
CSMD1-215ENST00000537824 ERBB3P21860 1342 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 F5H6K3 240 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 F8VP50 259 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 SPARCP09486 303 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 TUBP50607 506 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 PPP2R2DQ66LE6 453 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 CYP20A1Q6UW02 462 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 BBS12Q6ZW61 710 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF420Q8TAQ5 688 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 SLC7A5P2Q9GIP4 190 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 PRMT8Q9NR22 394 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 MYOCOSA0A1B0GUC4 107 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 MLYCDO95822 493 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 TRUB2O95900 331 aaKnown RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 DNTTP04053 509 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 YBX3P16989 372 aaKnown RBP eCLIP5.62□□□□□ -1.514e-6■□□□□ 11.2
CSMD1-215ENST00000537824 UQCRC1P31930 480 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 IL2P60568 153 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 RAB10P61026 200 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 SEZ6Q53EL9 994 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ANKRD13BQ86YJ7 626 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 DAGLBQ8NCG7 672 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 VCPIP1Q96JH7 1222 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 TMEM109Q9BVC6 243 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 NXF3Q9H4D5 531 aaKnown RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF225Q9UK10 706 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 TMEM5Q9Y2B1 443 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 SPIN1Q9Y657 262 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 SLX4Q8IY92 1834 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 RGPD8O14715 1765 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ARPC2O15144 300 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ENDOD1O94919 500 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 INMTO95050 263 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 UROSP10746 265 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 PRDX5P30044 214 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 NTSP30990 170 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 CLK3P49761 638 aaKnown RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 TAS2R40P59535 323 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 TSTQ16762 297 aaKnown RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 CBWD6Q4V339 395 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 PPM1JQ5JR12 505 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 GLT6D1Q7Z4J2 308 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ESX1Q8N693 406 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 HOPXQ9BPY8 73 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 RSPH9Q9H1X1 276 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 NANSQ9NR45 359 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 CLCA1A8K7I4 914 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ANKRD63C9JTQ0 380 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 GADD45AP24522 165 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 CLCN5P51795 746 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 FBXO43Q4G163 708 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 C4orf46Q504U0 113 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 XKR3Q5GH77 459 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 PAQR7Q86WK9 346 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 MFSD2AQ8NA29 543 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 C7orf57Q8NEG2 295 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 OR7G1Q8NGA0 311 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 OR8K3Q8NH51 312 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 TCEAL4Q96EI5 215 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 HSFY1Q96LI6 401 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF304Q9HCX3 659 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 QPCTLQ9NXS2 382 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 MINPP1Q9UNW1 487 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ARHGEF28Q8N1W1 1705 aaKnown RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF335Q9H4Z2 1342 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 FPGTO14772 594 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 CDH12P55289 794 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 NRG3P56975 720 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 PLD1Q13393 1074 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 TTLL4Q14679 1199 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 PLCZ1Q86YW0 608 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 RIT2Q99578 217 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 TRPV4Q9HBA0 871 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ARL15Q9NXU5 204 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 UGT2B17O75795 530 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 FARS2O95363 451 aaKnown RBP5.62□□□□□ -1.51
CSMD1-215ENST00000537824 CD4P01730 458 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 CLUP10909 449 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 SLC6A4P31645 630 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 MAP2K4P45985 399 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 PCID2Q5JVF3 399 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 GLYATQ6IB77 296 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 ADGRD2Q7Z7M1 963 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 CD101Q93033 1021 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 NKD1Q969G9 470 aa5.62□□□□□ -1.51
CSMD1-215ENST00000537824 CREB3L1Q96BA8 519 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms