RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ENO3P13929 434 aaPredicted RBP13.44□□□□□ -0.26
SMG6-203ENST00000536871 PCSK2P16519 638 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 HNF1BP35680 557 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 NSG1P42857 185 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 CDKN1CP49918 316 aaPredicted RBP13.44□□□□□ -0.26
SMG6-203ENST00000536871 CDH13P55290 713 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 ROR2Q01974 943 aaKnown RBP13.44□□□□□ -0.26
SMG6-203ENST00000536871 CCNIQ14094 377 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 FLOT2Q14254 428 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 CDKN3Q16667 212 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 ZNF423Q2M1K9 1284 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 AGKQ53H12 422 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 CLEC6AQ6EIG7 209 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 C22orf39Q6P5X5 142 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 TPGS1Q6ZTW0 290 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 MIER2Q8N344 545 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 EEF1AKMT1Q8WVE0 214 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 CCDC124Q96CT7 223 aaKnown RBP13.44□□□□□ -0.26
SMG6-203ENST00000536871 PLEKHG4BQ96PX9 1271 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 HGH1Q9BTY7 390 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 SUV39H2Q9H5I1 410 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 SUCOQ9UBS9 1254 aaKnown RBP13.44□□□□□ -0.26
SMG6-203ENST00000536871 PCTPQ9UKL6 214 aa13.44□□□□□ -0.26
SMG6-203ENST00000536871 K7ERQ8 282 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 OR1I1O60431 355 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 NRP2O60462 931 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 SIX3O95343 332 aaPredicted RBP13.43□□□□□ -0.26
SMG6-203ENST00000536871 BAG2O95816 211 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 CTPS1P17812 591 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 CD70P32970 193 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 BMPR1AP36894 532 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 VASPP50552 380 aaPredicted RBP13.43□□□□□ -0.26
SMG6-203ENST00000536871 MRPS35P82673 323 aaKnown RBP13.43□□□□□ -0.26
SMG6-203ENST00000536871 TRAP1Q12931 704 aaKnown RBP13.43□□□□□ -0.26
SMG6-203ENST00000536871 RPS6KA2Q15349 733 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 TGFBIQ15582 683 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 CARD16Q5EG05 197 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 IRGCQ6NXR0 463 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 SLC30A9Q6PML9 568 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 PNPLA1Q8N8W4 532 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 PDPRQ8NCN5 879 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 ASIC4Q96FT7 647 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 MCCC1Q96RQ3 725 aaPredicted RBP13.43□□□□□ -0.26
SMG6-203ENST00000536871 HOPXQ9BPY8 73 aaPredicted RBP13.43□□□□□ -0.26
SMG6-203ENST00000536871 FAM126AQ9BYI3 521 aaPredicted RBP13.43□□□□□ -0.26
SMG6-203ENST00000536871 AKTIPQ9H8T0 292 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 SPAG4Q9NPE6 437 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 CACNA2D2Q9NY47 1150 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 PSMD13Q9UNM6 376 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 SLC8A2Q9UPR5 921 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 MTF2Q9Y483 593 aaPredicted RBP13.43□□□□□ -0.26
SMG6-203ENST00000536871 PCNTO95613 3336 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 HTTP42858 3142 aa13.43□□□□□ -0.26
SMG6-203ENST00000536871 WASH3PC4AMC7 463 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 ZNF197O14709 1029 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 CASQ2O14958 399 aaPredicted RBP13.42□□□□□ -0.26
SMG6-203ENST00000536871 PIP5K1BO14986 540 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 ZNF821O75541 412 aaPredicted RBP13.42□□□□□ -0.26
SMG6-203ENST00000536871 BCAS2O75934 225 aaPredicted RBP13.42□□□□□ -0.26
SMG6-203ENST00000536871 ALPIP09923 528 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 HSPA8P11142 646 aaKnown RBP13.42□□□□□ -0.26
SMG6-203ENST00000536871 ZNF30P17039 623 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 RECQLP46063 649 aaPredicted RBP13.42□□□□□ -0.26
SMG6-203ENST00000536871 PIK3CGP48736 1102 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 PSME3P61289 254 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 FOXM1Q08050 763 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 KIF19Q2TAC6 998 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 SAMD4BQ5PRF9 694 aaKnown RBP13.42□□□□□ -0.26
SMG6-203ENST00000536871 REP15Q6BDI9 236 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 BRAT1Q6PJG6 821 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 FAM151BQ6UXP7 276 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 RNF165Q6ZSG1 346 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 GPRIN3Q6ZVF9 776 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 DDIASQ8IXT1 998 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 CPNE9Q8IYJ1 553 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 NRG4Q8WWG1 115 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 EID2BQ96D98 161 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 ASB9Q96DX5 294 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 TMEM106CQ9BVX2 250 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 CIPCQ9C0C6 399 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 RDH14Q9HBH5 336 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 TNFRSF12AQ9NP84 129 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 IL26Q9NPH9 171 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 TDP1Q9NUW8 608 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 GID8Q9NWU2 228 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 MARK1Q9P0L2 795 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 CROTQ9UKG9 612 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 INTS6Q9UL03 887 aaKnown RBP13.42□□□□□ -0.26
SMG6-203ENST00000536871 OARD1Q9Y530 152 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 PDLIM1O00151 329 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 CCL16O15467 120 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 PRR35P0CG20 571 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 CYP2A6P11509 494 aaPredicted RBP13.42□□□□□ -0.26
SMG6-203ENST00000536871 PABPC1P11940 636 aaKnown RBP13.42□□□□□ -0.26
SMG6-203ENST00000536871 BPIP17213 487 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 MSH3P20585 1137 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 NNMTP40261 264 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 ECT2LQ008S8 904 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 FPGSQ05932 587 aa13.42□□□□□ -0.26
SMG6-203ENST00000536871 KLC1Q07866 573 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms