RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SRP72O76094 671 aaKnown RBP12.97□□□□□ -0.33
PRKDC-206ENST00000536429 CRTAMO95727 393 aa12.97□□□□□ -0.33
PRKDC-206ENST00000536429 GPR89BP0CG08 455 aa12.97□□□□□ -0.33
PRKDC-206ENST00000536429 ZNF7P17097 686 aaPredicted RBP12.97□□□□□ -0.33
PRKDC-206ENST00000536429 CDKN1CP49918 316 aaPredicted RBP12.97□□□□□ -0.33
PRKDC-206ENST00000536429 CFHR1Q03591 330 aa12.97□□□□□ -0.33
PRKDC-206ENST00000536429 NFATC2Q13469 925 aa12.97□□□□□ -0.33
PRKDC-206ENST00000536429 SEMA5AQ13591 1074 aa12.97□□□□□ -0.33
PRKDC-206ENST00000536429 SEPT6Q14141 434 aa12.97□□□□□ -0.33
PRKDC-206ENST00000536429 SEPT7Q16181 437 aaKnown RBP12.97□□□□□ -0.33
PRKDC-206ENST00000536429 INSCQ1MX18 579 aa12.97□□□□□ -0.33
PRKDC-206ENST00000536429 CCDC38Q502W7 563 aa12.97□□□□□ -0.33
PRKDC-206ENST00000536429 C3orf38Q5JPI3 329 aa12.97□□□□□ -0.33
PRKDC-206ENST00000536429 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.97□□□□□ -0.33
PRKDC-206ENST00000536429 DRICH1Q6PGQ1 229 aaPredicted RBP12.97□□□□□ -0.33
PRKDC-206ENST00000536429 IYDQ6PHW0 289 aa12.97□□□□□ -0.33
PRKDC-206ENST00000536429 USP53Q70EK8 1073 aa12.97□□□□□ -0.33
PRKDC-206ENST00000536429 DET1Q7L5Y6 550 aa12.97□□□□□ -0.33
PRKDC-206ENST00000536429 TRAPPC5Q8IUR0 188 aa12.97□□□□□ -0.33
PRKDC-206ENST00000536429 BEND7Q8N7W2 519 aaPredicted RBP12.97□□□□□ -0.33
PRKDC-206ENST00000536429 CCDC89Q8N998 374 aa12.97□□□□□ -0.33
PRKDC-206ENST00000536429 PRR11Q96HE9 360 aaPredicted RBP12.97□□□□□ -0.33
PRKDC-206ENST00000536429 ASB8Q9H765 288 aa12.97□□□□□ -0.33
PRKDC-206ENST00000536429 FEZ2Q9UHY8 353 aaPredicted RBP12.97□□□□□ -0.33
PRKDC-206ENST00000536429 MYLKQ15746 1914 aa12.97□□□□□ -0.33
PRKDC-206ENST00000536429 URB1O60287 2271 aaKnown RBP12.96□□□□□ -0.33
PRKDC-206ENST00000536429 PRAMEF33A0A0G2JMD5 474 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 OR2AG2A6NM03 316 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 KMOO15229 486 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 SGTAO43765 313 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 SUN1O94901 812 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 HGFP14210 728 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 HOXB3P14651 431 aaPredicted RBP12.96□□□□□ -0.33
PRKDC-206ENST00000536429 BRAFP15056 766 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 CD1CP29017 333 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 CSF2RBP32927 897 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 FDFT1P37268 417 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 FASLGP48023 281 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 ARSDP51689 593 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 CLCNKAP51800 687 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 DRG2P55039 364 aaKnown RBP12.96□□□□□ -0.33
PRKDC-206ENST00000536429 ITGA9Q13797 1035 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 LDLRAP1Q5SW96 308 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 TMEM220Q6QAJ8 160 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 XKR5Q6UX68 686 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 ZNF574Q6ZN55 896 aaPredicted RBP12.96□□□□□ -0.33
PRKDC-206ENST00000536429 FAM83HQ6ZRV2 1179 aaPredicted RBP12.96□□□□□ -0.33
PRKDC-206ENST00000536429 SLITRK4Q8IW52 837 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 RASGEF1CQ8N431 466 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 WDR48Q8TAF3 677 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 COG1Q8WTW3 980 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 SGF29Q96ES7 293 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 TIMM29Q9BSF4 260 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 SEMA6CQ9H3T2 930 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 EPB41L5Q9HCM4 733 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 TMEM9Q9P0T7 183 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 PAK5Q9P286 719 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 PYCARDQ9ULZ3 195 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 DRG1Q9Y295 367 aaKnown RBP12.96□□□□□ -0.33
PRKDC-206ENST00000536429 WDR37Q9Y2I8 494 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 JRKLQ9Y4A0 524 aa12.96□□□□□ -0.33
PRKDC-206ENST00000536429 ZFYVE26Q68DK2 2539 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 IGHV1OR21-1A0A087WYE8 117 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 MROH6A6NGR9 719 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 OR51F1A6NGY5 319 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 AGAP14A8MT82 685 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 PSMD3O43242 534 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 POP7O75817 140 aaKnown RBP12.95□□□□□ -0.34
PRKDC-206ENST00000536429 APRTP07741 180 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 F3P13726 295 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 MPSTP25325 297 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 RPL10P27635 214 aaKnown RBP12.95□□□□□ -0.34
PRKDC-206ENST00000536429 AKT1P31749 480 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 MC4RP32245 332 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 LSSP48449 732 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 INHBCP55103 352 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 UBE2IP63279 158 aaKnown RBP12.95□□□□□ -0.34
PRKDC-206ENST00000536429 HHEXQ03014 270 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 ZFP36L1Q07352 338 aaKnown RBP12.95□□□□□ -0.34
PRKDC-206ENST00000536429 BIRC2Q13490 618 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 GTF2H3Q13889 308 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 TRIP13Q15645 432 aaPredicted RBP12.95□□□□□ -0.34
PRKDC-206ENST00000536429 MAP9Q49MG5 647 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 FNBP1LQ5T0N5 605 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 TTC27Q6P3X3 843 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 FOXR1Q6PIV2 292 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 PIANPQ8IYJ0 282 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 DNAAF3Q8N9W5 541 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 LRRC45Q96CN5 670 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 TTC25Q96NG3 672 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 AP1M1Q9BXS5 423 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 POLR1BQ9H9Y6 1135 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 ASCL3Q9NQ33 180 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 CASS4Q9NQ75 786 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 NLE1Q9NVX2 485 aaPredicted RBP12.95□□□□□ -0.34
PRKDC-206ENST00000536429 KCNK4Q9NYG8 393 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 ZNF624Q9P2J8 865 aaPredicted RBP12.95□□□□□ -0.34
PRKDC-206ENST00000536429 SLC2A6Q9UGQ3 507 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 ZKSCAN5Q9Y2L8 839 aa12.95□□□□□ -0.34
PRKDC-206ENST00000536429 UNC13CQ8NB66 2214 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms