RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 KMOO15229 486 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 VEGFDO43915 354 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 PRAMEF1O95521 474 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 RBMS1P29558 406 aaKnown RBP14.06□□□□□ -0.16
UBE3B-206ENST00000536398 CCKBRP32239 447 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 CSF2RBP32927 897 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 GPR3P46089 330 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 FASLGP48023 281 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 ZNF140P52738 457 aaPredicted RBP14.06□□□□□ -0.16
UBE3B-206ENST00000536398 XIAPP98170 497 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 INSCQ1MX18 579 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 MAP9Q49MG5 647 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 PHF19Q5T6S3 580 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 GPRC6AQ5T6X5 926 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 RAB11FIP2Q7L804 512 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 C11orf96Q7Z7L8 435 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 LSMEM2Q8N112 164 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 FBXO39Q8N4B4 442 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 GLIS1Q8NBF1 620 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 DTX3LQ8TDB6 740 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 RTP4Q96DX8 246 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 TMEM74Q96NL1 305 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 TLR10Q9BXR5 811 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 ARNT2Q9HBZ2 717 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 KCNK4Q9NYG8 393 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 LHX6Q9UPM6 363 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 PCDHGA8Q9Y5G5 932 aa14.06□□□□□ -0.16
UBE3B-206ENST00000536398 CDRT15L2A8MXV6 281 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 GPR89AB7ZAQ6 455 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 PLD2O14939 933 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 LDB2O43679 373 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 SRP72O76094 671 aaKnown RBP14.05□□□□□ -0.16
UBE3B-206ENST00000536398 CPNE6O95741 557 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 IFNB1P01574 187 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 ZSCAN5DPP0CG00 497 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 GPR89BP0CG08 455 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 F3P13726 295 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 BRAFP15056 766 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 ITIH1P19827 911 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 RPL10P27635 214 aaKnown RBP14.05□□□□□ -0.16
UBE3B-206ENST00000536398 CLCNKAP51800 687 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 HHEXQ03014 270 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 C16orf72Q14CZ0 275 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 TMEM220Q6QAJ8 160 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 DET1Q7L5Y6 550 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 PIM3Q86V86 326 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 TRAPPC5Q8IUR0 188 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 RCBTB1Q8NDN9 531 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 DNAJC1Q96KC8 554 aaKnown RBP14.05□□□□□ -0.16
UBE3B-206ENST00000536398 ALS2CR12Q96Q35 445 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 SLC38A3Q99624 504 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 TIMM29Q9BSF4 260 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 STRADBQ9C0K7 418 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 ASB8Q9H765 288 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 ETNK1Q9HBU6 452 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 SARS2Q9NP81 518 aaKnown RBP14.05□□□□□ -0.16
UBE3B-206ENST00000536398 ZNF624Q9P2J8 865 aaPredicted RBP14.05□□□□□ -0.16
UBE3B-206ENST00000536398 CPNE7Q9UBL6 633 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 ZNF148Q9UQR1 794 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 WDR37Q9Y2I8 494 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 LOXL2Q9Y4K0 774 aa14.05□□□□□ -0.16
UBE3B-206ENST00000536398 ZFC3H1O60293 1989 aaKnown RBP14.04□□□□□ -0.16
UBE3B-206ENST00000536398 IGHV5-10-1A0A0J9YXX1 117 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 CCDC78A2IDD5 438 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 OR2AG2A6NM03 316 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 PDZK1P1A8MUH7 402 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 TMX2-CTNND1H3BSU7 103 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 PPFIA2O75334 1257 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 POP7O75817 140 aaKnown RBP14.04□□□□□ -0.16
UBE3B-206ENST00000536398 ZNF189O75820 626 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-206ENST00000536398 CRTAMO95727 393 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 AP2A1O95782 977 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 PRSS56P0CW18 603 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 CXCR5P32302 372 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 ETV5P41161 510 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 GRIA1P42261 906 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 CDKN1CP49918 316 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-206ENST00000536398 DRG2P55039 364 aaKnown RBP14.04□□□□□ -0.16
UBE3B-206ENST00000536398 ERVPABLB-1P60509 514 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 UBE2IP63279 158 aaKnown RBP14.04□□□□□ -0.16
UBE3B-206ENST00000536398 ITGA9Q13797 1035 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 GTF2H3Q13889 308 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 POU6F1Q14863 301 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 P3H1Q32P28 736 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 LDLRAP1Q5SW96 308 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 IGF2-ASQ6U949 168 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 FAM83HQ6ZRV2 1179 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-206ENST00000536398 BEND7Q8N7W2 519 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-206ENST00000536398 DDHD1Q8NEL9 900 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 SGF29Q96ES7 293 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 CCDC74BQ96LY2 380 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 TTC25Q96NG3 672 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 PPP1R2P1Q96PQ5 205 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 TBC1D10AQ9BXI6 508 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 LRRC40Q9H9A6 602 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 SMOXQ9NWM0 555 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 PISDQ9UG56 409 aa14.04□□□□□ -0.16
UBE3B-206ENST00000536398 ADAMTS20P59510 1910 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 LOC400499M0QZD8 3231 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 OR52A4PA6NMU1 304 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms