RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 GDAP1Q8TB36 358 aa12.94□□□□□ -0.34
RTN3-207ENST00000536011 BRSK1Q8TDC3 778 aa12.94□□□□□ -0.34
RTN3-207ENST00000536011 JPH3Q8WXH2 748 aaPredicted RBP12.94□□□□□ -0.34
RTN3-207ENST00000536011 EID2BQ96D98 161 aa12.94□□□□□ -0.34
RTN3-207ENST00000536011 RBM41Q96IZ5 413 aaKnown RBP12.94□□□□□ -0.34
RTN3-207ENST00000536011 TRIT1Q9H3H1 467 aaKnown RBP12.94□□□□□ -0.34
RTN3-207ENST00000536011 ARFGAP3Q9NP61 516 aa12.94□□□□□ -0.34
RTN3-207ENST00000536011 PRDM8Q9NQV8 689 aa12.94□□□□□ -0.34
RTN3-207ENST00000536011 FBXO8Q9NRD0 319 aa12.94□□□□□ -0.34
RTN3-207ENST00000536011 POT1Q9NUX5 634 aa12.94□□□□□ -0.34
RTN3-207ENST00000536011 OCIAD1Q9NX40 245 aa12.94□□□□□ -0.34
RTN3-207ENST00000536011 ADGRG1Q9Y653 693 aa12.94□□□□□ -0.34
RTN3-207ENST00000536011 FLNBO75369 2602 aaKnown RBP12.94□□□□□ -0.34
RTN3-207ENST00000536011 SDK2Q58EX2 2172 aa12.94□□□□□ -0.34
RTN3-207ENST00000536011 SETXQ7Z333 2677 aaKnown RBP12.93□□□□□ -0.34
RTN3-207ENST00000536011 ZNF891A8MT65 544 aaPredicted RBP12.93□□□□□ -0.34
RTN3-207ENST00000536011 HACD1B0YJ81 288 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 POLR1CO15160 346 aaPredicted RBP12.93□□□□□ -0.34
RTN3-207ENST00000536011 TOX3O15405 576 aaPredicted RBP12.93□□□□□ -0.34
RTN3-207ENST00000536011 KCNJ13O60928 360 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 PPFIA2O75334 1257 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 ZRANB2O95218 330 aaKnown RBP eCLIP12.93□□□□□ -0.34
RTN3-207ENST00000536011 IDSP22304 550 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 HALP42357 657 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 MAGEA1P43355 309 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 NFATC3Q12968 1075 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 SPA17Q15506 151 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 TBR1Q16650 682 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 AGAP9Q5VTM2 703 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 KAZNQ674X7 775 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 BORAQ6PGQ7 559 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 WASH2PQ6VEQ5 465 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 TMEM26Q6ZUK4 368 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 PRICKLE2Q7Z3G6 844 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 TRAPPC5Q8IUR0 188 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 CCDC50Q8IVM0 306 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 RCOR2Q8IZ40 523 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 NLGN4XQ8N0W4 816 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 RNF214Q8ND24 703 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 NLGN4YQ8NFZ3 816 aaPredicted RBP12.93□□□□□ -0.34
RTN3-207ENST00000536011 DTX3LQ8TDB6 740 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 PMEPA1Q969W9 287 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 CALR3Q96L12 384 aaKnown RBP12.93□□□□□ -0.34
RTN3-207ENST00000536011 CATSPER2Q96P56 530 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 FSD1LQ9BXM9 530 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 WASH6PQ9NQA3 447 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 PILRAQ9UKJ1 303 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 TRHDEQ9UKU6 1024 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 PKP3Q9Y446 797 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 HYOU1Q9Y4L1 999 aa12.93□□□□□ -0.34
RTN3-207ENST00000536011 TLN1Q9Y490 2541 aaKnown RBP12.93□□□□□ -0.34
RTN3-207ENST00000536011 LOC285095A0A1B0GVY8 99 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 UBXN7O94888 489 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 IPO7O95373 1038 aaKnown RBP12.92□□□□□ -0.34
RTN3-207ENST00000536011 FAM87AP0C7U9 286 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 LIFP15018 202 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 AMD1P17707 334 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 NFKB1P19838 968 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 HLA-DPA1P20036 260 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 SPAM1P38567 509 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 ARSDP51689 593 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 WNT3AP56704 352 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 MPP3Q13368 585 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 ITGA9Q13797 1035 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 PLA2G4EQ3MJ16 856 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 LINC00303Q3SY05 128 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 LDLRAP1Q5SW96 308 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 C11orf63Q6NUN7 778 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 GLT6D1Q7Z4J2 308 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 CCDC170Q8IYT3 715 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 EXD3Q8N9H8 876 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 HTR3CQ8WXA8 447 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 CXorf40BQ96DE9 158 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 RTP4Q96DX8 246 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 QKIQ96PU8 341 aaKnown RBP eCLIP12.92□□□□□ -0.341e-6■■■□□ 15.5
RTN3-207ENST00000536011 TBC1D10AQ9BXI6 508 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 ADNPQ9H2P0 1102 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 GPN2Q9H9Y4 310 aaPredicted RBP12.92□□□□□ -0.34
RTN3-207ENST00000536011 STARD5Q9NSY2 213 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 UBP1Q9NZI7 540 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 SAE1Q9UBE0 346 aaPredicted RBP12.92□□□□□ -0.34
RTN3-207ENST00000536011 KLHL3Q9UH77 587 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 DNAJC16Q9Y2G8 782 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 SPO11Q9Y5K1 396 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 ALG6Q9Y672 507 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 BSNQ9UPA5 3926 aa12.92□□□□□ -0.34
RTN3-207ENST00000536011 hCG_1818297A0A087WSY0 165 aa12.91□□□□□ -0.34
RTN3-207ENST00000536011 ZNF189O75820 626 aaPredicted RBP12.91□□□□□ -0.34
RTN3-207ENST00000536011 STK17BO94768 372 aa12.91□□□□□ -0.34
RTN3-207ENST00000536011 STK10O94804 968 aaKnown RBP12.91□□□□□ -0.34
RTN3-207ENST00000536011 PECAM1P16284 738 aaPredicted RBP12.91□□□□□ -0.34
RTN3-207ENST00000536011 WT1P19544 449 aaPredicted RBP12.91□□□□□ -0.34
RTN3-207ENST00000536011 CYLC1P35663 651 aaPredicted RBP12.91□□□□□ -0.34
RTN3-207ENST00000536011 CAPZBP47756 277 aa12.91□□□□□ -0.34
RTN3-207ENST00000536011 MC1RQ01726 317 aa12.91□□□□□ -0.34
RTN3-207ENST00000536011 ABHD18Q0P651 414 aa12.91□□□□□ -0.34
RTN3-207ENST00000536011 WASHC5Q12768 1159 aa12.91□□□□□ -0.34
RTN3-207ENST00000536011 TMEM115Q12893 351 aaPredicted RBP12.91□□□□□ -0.34
RTN3-207ENST00000536011 TBX2Q13207 712 aaPredicted RBP12.91□□□□□ -0.34
RTN3-207ENST00000536011 MAP7Q14244 749 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms