RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SUN2Q9UH99 717 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 RAI2Q9Y5P3 530 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 FAM149AA5PLN7 773 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 ASPDHA6ND91 283 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 H7C4K7 107 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 PDLIM1O00151 329 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 E2F3O00716 465 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 ENPP3O14638 875 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 BAIAP3O94812 1187 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 SLC10A3P09131 477 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 PRKAR2AP13861 404 aaKnown RBP15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 MC4RP32245 332 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 PRKCZQ05513 592 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 SREBF2Q12772 1141 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 RBBP7Q16576 425 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 PAGE3Q5JUK9 113 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 C6orf136Q5SQH8 315 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 PSAPL1Q6NUJ1 521 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 UGT3A1Q6NUS8 523 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 GPRIN3Q6ZVF9 776 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 EPHX4Q8IUS5 362 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 TBC1D21Q8IYX1 336 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 SIDT2Q8NBJ9 832 aaKnown RBP15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 EXOC2Q96KP1 924 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 ZBED2Q9BTP6 218 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 ADI1Q9BV57 179 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 NACA2Q9H009 215 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 CD320Q9NPF0 282 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 PCDHGC4Q9Y5F7 938 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 ANKRD12Q6UB98 2062 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 A0A087WXM4 84 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 FAM234BA2RU67 622 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 GRXCR2A6NFK2 248 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 H7C0S8 307 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 INPP4BO15327 924 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 OR1I1O60431 355 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 RASAL1O95294 804 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 F11P03951 625 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 NELFEP18615 380 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 PCSK6P29122 969 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 OXTRP30559 389 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 APLP1P51693 650 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 ELAVL2Q12926 359 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 ZNF177Q13360 481 aaPredicted RBP15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 ATP6AP1Q15904 470 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 SLC36A3Q495N2 470 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 RABL3Q5HYI8 236 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 AARS2Q5JTZ9 985 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 IFNEQ86WN2 208 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 ERI1Q8IV48 349 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 KIAA2013Q8IYS2 634 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 LPCAT1Q8NF37 534 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 CD200R1Q8TD46 325 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 ADAMTS16Q8TE57 1224 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 ZNF382Q96SR6 550 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 ACOX2Q99424 681 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 ELAC1Q9H777 363 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 CD274Q9NZQ7 290 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 FKBPLQ9UIM3 349 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 TCRBV5S2A0A599 114 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 TRIM64CA6NLI5 447 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 ACOX3O15254 700 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 STX7O15400 261 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 TPST1O60507 370 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 NIPSNAP2O75323 286 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 ESR1P03372 595 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 PTGER3P43115 390 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 HK3P52790 923 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 PRKG2Q13237 762 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 FXNQ16595 210 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 CTSL3PQ5NE16 218 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 NANOGP8Q6NSW7 305 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 TTC33Q6PID6 262 aaPredicted RBP15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 PRR23BQ6ZRT6 265 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 PROSER1Q86XN7 944 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 DENND1CQ8IV53 801 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 TNIP2Q8NFZ5 429 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 PROKR1Q8TCW9 393 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 DIS3LQ8TF46 1054 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 LINGO1Q96FE5 620 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 PDLIM5Q96HC4 596 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 CEP295NLQ96MC4 621 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 NANOGQ9H9S0 305 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 OAZ3Q9UMX2 235 aa15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 ZFC3H1O60293 1989 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-202ENST00000535997 TRIM64A6NGJ6 449 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 RHOCP08134 193 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 ENO2P09104 434 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 GNAO1P09471 354 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 ATF6P18850 670 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 UGT1A6P19224 532 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 HTR1EP28566 365 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 RFC2P35250 354 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 EMX2Q04743 252 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 TGFBIQ15582 683 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 ATP6AP1LQ52LC2 224 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 RTP2Q5QGT7 225 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 FUT10Q6P4F1 479 aa15.86■□□□□ 0.13
CHMP1A-202ENST00000535997 Q6ZSR9 355 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms