RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ASB1Q9Y576 335 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 TIMM22Q9Y584 194 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 PDE4DIPQ5VU43 2346 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 C15orf38-AP3S2A0A0A6YYH1 394 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 A0A0J9YYE9 177 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 E7ENX8 843 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 STX16O14662 325 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 HTRA2O43464 458 aaPredicted RBP13.24□□□□□ -0.29
VPS33B-202ENST00000535906 TRBC1P01850 177 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 LRG1P02750 347 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 CTSAP10619 480 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 PPM1AP35813 382 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 NME5P56597 212 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 BCL2L1Q07817 233 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 TRIM25Q14258 630 aaKnown RBP13.24□□□□□ -0.29
VPS33B-202ENST00000535906 DGKKQ5KSL6 1271 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 ARPINQ7Z6K5 226 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 SPATA24Q86W54 205 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 CPXM2Q8N436 756 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 PKP2Q99959 881 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 BOCQ9BWV1 1114 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 SPATA16Q9BXB7 569 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 C1QTNF3Q9BXJ4 246 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 ZFYVE1Q9HBF4 777 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 PCTPQ9UKL6 214 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 PTPRSQ13332 1948 aa13.24□□□□□ -0.29
VPS33B-202ENST00000535906 C1orf232A0A0U1RR37 186 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 A8MX80 341 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 PRMT5O14744 637 aaPredicted RBP13.23□□□□□ -0.29
VPS33B-202ENST00000535906 TRIM24O15164 1050 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 NRP2O60462 931 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 CLDN7O95471 211 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 PRAMEF1O95521 474 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 HNF1BP35680 557 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 ACADVLP49748 655 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 ATP4BP51164 291 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 POLE2P56282 527 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 ROR2Q01974 943 aaKnown RBP13.23□□□□□ -0.29
VPS33B-202ENST00000535906 PLEKHG6Q3KR16 790 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 MPPE1Q53F39 396 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 LILRA6Q6PI73 481 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 GPSM1Q86YR5 675 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 STK40Q8N2I9 435 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 FIBCD1Q8N539 461 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 FIBINQ8TAL6 211 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 SLC25A23Q9BV35 468 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 SLC46A2Q9BY10 475 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 POLG2Q9UHN1 485 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 TSR3Q9UJK0 312 aaKnown RBP13.23□□□□□ -0.29
VPS33B-202ENST00000535906 COMMD10Q9Y6G5 202 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 MYOFQ9NZM1 2061 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 LEFTY2O00292 366 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 CSPG5O95196 566 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 C8AP07357 584 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 LINC00271P0C7V0 271 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 PABPC4LP0CB38 370 aaKnown RBP13.23□□□□□ -0.29
VPS33B-202ENST00000535906 GRIA2P42262 883 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 CTSOP43234 321 aaPredicted RBP13.23□□□□□ -0.29
VPS33B-202ENST00000535906 STX1BP61266 288 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 TGFBIQ15582 683 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 CDKN3Q16667 212 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 KIF19Q2TAC6 998 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 MPP7Q5T2T1 576 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 LAYNQ6UX15 382 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 SYVN1Q86TM6 617 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 SERPINA9Q86WD7 417 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 ZSWIM9Q86XI8 627 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 TMEM102Q8N9M5 508 aaPredicted RBP13.23□□□□□ -0.29
VPS33B-202ENST00000535906 VOPP1Q96AW1 172 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 TUBGCP3Q96CW5 907 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 PAWRQ96IZ0 340 aaKnown RBP13.23□□□□□ -0.29
VPS33B-202ENST00000535906 PLEKHG4BQ96PX9 1271 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 SPAG4Q9NPE6 437 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 IL26Q9NPH9 171 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 ABCB8Q9NUT2 735 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 CD274Q9NZQ7 290 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 KIAA1522Q9P206 1035 aaPredicted RBP13.23□□□□□ -0.29
VPS33B-202ENST00000535906 DHRS7Q9Y394 339 aa13.23□□□□□ -0.29
VPS33B-202ENST00000535906 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.22□□□□□ -0.29
VPS33B-202ENST00000535906 E2F3O00716 465 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 MRASO14807 208 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 CXCL14O95715 111 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 C8BP07358 591 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 HGFP14210 728 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 STK19P49842 368 aaPredicted RBP13.22□□□□□ -0.29
VPS33B-202ENST00000535906 TRAP1Q12931 704 aaKnown RBP13.22□□□□□ -0.29
VPS33B-202ENST00000535906 CNPY1Q3B7I2 92 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 CWF19L1Q69YN2 538 aaKnown RBP13.22□□□□□ -0.29
VPS33B-202ENST00000535906 TXNDC11Q6PKC3 985 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 HACD2Q6Y1H2 254 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 CERS6Q6ZMG9 384 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 GPR65Q8IYL9 337 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 CMTM8Q8IZV2 173 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 PAF1Q8N7H5 531 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 SLC22A17Q8WUG5 538 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 CORO1BQ9BR76 489 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 HGH1Q9BTY7 390 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 CIPCQ9C0C6 399 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 ASB8Q9H765 288 aa13.22□□□□□ -0.29
VPS33B-202ENST00000535906 CCL26Q9Y258 94 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms