RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 B4GAT1O43505 415 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 SUPT7LO94864 414 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 MATN4O95460 622 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 HPCAL1P37235 193 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 GSK3BP49841 420 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 PLA2G16P53816 162 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 RPS6KA2Q15349 733 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 SKIV2LQ15477 1246 aaKnown RBP8.84□□□□□ -0.99
SORL1-213ENST00000534754 LDLRAP1Q5SW96 308 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 RBM20Q5T481 1227 aaKnown RBP8.84□□□□□ -0.99
SORL1-213ENST00000534754 C9orf57Q5W0N0 161 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 CRTC3Q6UUV7 619 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 TFAP2DQ7Z6R9 452 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 KLHDC8BQ8IXV7 354 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 CLYBLQ8N0X4 340 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 PARP8Q8N3A8 854 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.84□□□□□ -0.99
SORL1-213ENST00000534754 PDZD8Q8NEN9 1154 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 BEST2Q8NFU1 509 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 S100ZQ8WXG8 99 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 L3HYPDHQ96EM0 354 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 SLC2A13Q96QE2 648 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 ALG2Q9H553 416 aa8.84□□□□□ -0.99
SORL1-213ENST00000534754 WARS2Q9UGM6 360 aaKnown RBP8.84□□□□□ -0.99
SORL1-213ENST00000534754 GREB1Q4ZG55 1949 aa8.83□□□□□ -1
SORL1-213ENST00000534754 A0A1W2PPC1 479 aa8.83□□□□□ -1
SORL1-213ENST00000534754 EPOPA6NHQ4 379 aa8.83□□□□□ -1
SORL1-213ENST00000534754 ANXA9O76027 345 aa8.83□□□□□ -1
SORL1-213ENST00000534754 UGT2B4P06133 528 aa8.83□□□□□ -1
SORL1-213ENST00000534754 PABPC1P11940 636 aaKnown RBP8.83□□□□□ -1
SORL1-213ENST00000534754 S100A1P23297 94 aa8.83□□□□□ -1
SORL1-213ENST00000534754 LMO2P25791 158 aa8.83□□□□□ -1
SORL1-213ENST00000534754 OR1G1P47890 313 aa8.83□□□□□ -1
SORL1-213ENST00000534754 KPNA1P52294 538 aaPredicted RBP8.83□□□□□ -1
SORL1-213ENST00000534754 RAD23AP54725 363 aa8.83□□□□□ -1
SORL1-213ENST00000534754 LIPEQ05469 1076 aa8.83□□□□□ -1
SORL1-213ENST00000534754 LRIT3Q3SXY7 679 aa8.83□□□□□ -1
SORL1-213ENST00000534754 UGT3A2Q3SY77 523 aa8.83□□□□□ -1
SORL1-213ENST00000534754 PERM1Q5SV97 790 aa8.83□□□□□ -1
SORL1-213ENST00000534754 OTUD3Q5T2D3 398 aaPredicted RBP8.83□□□□□ -1
SORL1-213ENST00000534754 AGAP7PQ5VUJ5 663 aa8.83□□□□□ -1
SORL1-213ENST00000534754 KIAA0930Q6ICG6 404 aaPredicted RBP8.83□□□□□ -1
SORL1-213ENST00000534754 NEPROQ6NW34 567 aa8.83□□□□□ -1
SORL1-213ENST00000534754 LINC00299Q6ZSB3 139 aa8.83□□□□□ -1
SORL1-213ENST00000534754 THAP5Q7Z6K1 395 aa8.83□□□□□ -1
SORL1-213ENST00000534754 IFNEQ86WN2 208 aa8.83□□□□□ -1
SORL1-213ENST00000534754 CCDC117Q8IWD4 279 aaPredicted RBP8.83□□□□□ -1
SORL1-213ENST00000534754 DCP1BQ8IZD4 617 aaKnown RBP8.83□□□□□ -1
SORL1-213ENST00000534754 CADM3Q8N126 398 aa8.83□□□□□ -1
SORL1-213ENST00000534754 IPMKQ8NFU5 416 aa8.83□□□□□ -1
SORL1-213ENST00000534754 C17orf50Q8WW18 174 aa8.83□□□□□ -1
SORL1-213ENST00000534754 TMEM125Q96AQ2 219 aa8.83□□□□□ -1
SORL1-213ENST00000534754 SLC30A3Q99726 388 aa8.83□□□□□ -1
SORL1-213ENST00000534754 ADNPQ9H2P0 1102 aa8.83□□□□□ -1
SORL1-213ENST00000534754 CERS4Q9HA82 394 aa8.83□□□□□ -1
SORL1-213ENST00000534754 HPS4Q9NQG7 708 aa8.83□□□□□ -1
SORL1-213ENST00000534754 SLC2A6Q9UGQ3 507 aa8.83□□□□□ -1
SORL1-213ENST00000534754 PFDN6O15212 129 aa8.82□□□□□ -1
SORL1-213ENST00000534754 CACNG3O60359 315 aa8.82□□□□□ -1
SORL1-213ENST00000534754 BCAS1O75363 584 aaPredicted RBP8.82□□□□□ -1
SORL1-213ENST00000534754 RSL1D1O76021 490 aaKnown RBP8.82□□□□□ -1
SORL1-213ENST00000534754 EFEMP2O95967 443 aa8.82□□□□□ -1
SORL1-213ENST00000534754 NCK1P16333 377 aa8.82□□□□□ -1
SORL1-213ENST00000534754 TSPAN8P19075 237 aa8.82□□□□□ -1
SORL1-213ENST00000534754 CHRM3P20309 590 aa8.82□□□□□ -1
SORL1-213ENST00000534754 CRHBPP24387 322 aa8.82□□□□□ -1
SORL1-213ENST00000534754 SHMT2P34897 504 aa8.82□□□□□ -1
SORL1-213ENST00000534754 BRCC3P46736 316 aa8.82□□□□□ -1
SORL1-213ENST00000534754 LEPRP48357 1165 aaKnown RBP8.82□□□□□ -1
SORL1-213ENST00000534754 ALDH3A2P51648 485 aa8.82□□□□□ -1
SORL1-213ENST00000534754 CLCN5P51795 746 aa8.82□□□□□ -1
SORL1-213ENST00000534754 SMAD3P84022 425 aaKnown RBP8.82□□□□□ -1
SORL1-213ENST00000534754 NFYCQ13952 458 aa8.82□□□□□ -1
SORL1-213ENST00000534754 SPCS2Q15005 226 aa8.82□□□□□ -1
SORL1-213ENST00000534754 ZIK1Q3SY52 487 aaPredicted RBP8.82□□□□□ -1
SORL1-213ENST00000534754 ZNF678Q5SXM1 525 aa8.82□□□□□ -1
SORL1-213ENST00000534754 SPOUT1Q5T280 376 aaKnown RBP8.82□□□□□ -1
SORL1-213ENST00000534754 SLC2A7Q6PXP3 512 aa8.82□□□□□ -1
SORL1-213ENST00000534754 TBPL2Q6SJ96 375 aa8.82□□□□□ -1
SORL1-213ENST00000534754 R3HCC1LQ7Z5L2 792 aaKnown RBP8.82□□□□□ -1
SORL1-213ENST00000534754 BTLAQ7Z6A9 289 aa8.82□□□□□ -1
SORL1-213ENST00000534754 SPARTQ8N0X7 666 aa8.82□□□□□ -1
SORL1-213ENST00000534754 SLC39A11Q8N1S5 342 aa8.82□□□□□ -1
SORL1-213ENST00000534754 SPATA22Q8NHS9 363 aa8.82□□□□□ -1
SORL1-213ENST00000534754 GABPB2Q8TAK5 448 aaPredicted RBP8.82□□□□□ -1
SORL1-213ENST00000534754 TSPEARQ8WU66 669 aa8.82□□□□□ -1
SORL1-213ENST00000534754 HDAC2Q92769 488 aaKnown RBP8.82□□□□□ -1
SORL1-213ENST00000534754 HPS1Q92902 700 aa8.82□□□□□ -1
SORL1-213ENST00000534754 TSGA13Q96PP4 275 aa8.82□□□□□ -1
SORL1-213ENST00000534754 FAM193BQ96PV7 902 aaPredicted RBP8.82□□□□□ -1
SORL1-213ENST00000534754 ASB2Q96Q27 587 aa8.82□□□□□ -1
SORL1-213ENST00000534754 TSPAN18Q96SJ8 248 aa8.82□□□□□ -1
SORL1-213ENST00000534754 CYP2S1Q96SQ9 504 aa8.82□□□□□ -1
SORL1-213ENST00000534754 TMEM175Q9BSA9 504 aa8.82□□□□□ -1
SORL1-213ENST00000534754 FICDQ9BVA6 458 aa8.82□□□□□ -1
SORL1-213ENST00000534754 FUNDC2Q9BWH2 189 aa8.82□□□□□ -1
SORL1-213ENST00000534754 CHID1Q9BWS9 393 aa8.82□□□□□ -1
SORL1-213ENST00000534754 DUSP16Q9BY84 665 aa8.82□□□□□ -1
SORL1-213ENST00000534754 KLHL25Q9H0H3 589 aa8.82□□□□□ -1
SORL1-213ENST00000534754 AKIP1Q9NQ31 210 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms