RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 KIF1CO43896 1103 aaKnown RBP13.66□□□□□ -0.22
CCDC84-208ENST00000534656 VEGFDO43915 354 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 KATNA1O75449 491 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 SPAG6O75602 509 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 RASSF9O75901 435 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 PROSCO94903 275 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 RECKO95980 971 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 SERPINC1P01008 464 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 KRT7P08729 469 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 CCNYL3P0C7X3 344 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 BRAFP15056 766 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 TAS2R40P59535 323 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 IFI35P80217 286 aaPredicted RBP13.66□□□□□ -0.22
CCDC84-208ENST00000534656 PPIDQ08752 370 aaKnown RBP13.66□□□□□ -0.22
CCDC84-208ENST00000534656 ZBTB17Q13105 803 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 NFKBIBQ15653 356 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 SEPT7Q16181 437 aaKnown RBP13.66□□□□□ -0.22
CCDC84-208ENST00000534656 PLA2G4EQ3MJ16 856 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 RBM12BQ8IXT5 1001 aaKnown RBP13.66□□□□□ -0.22
CCDC84-208ENST00000534656 KLHL6Q8WZ60 621 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 RSC1A1Q92681 617 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 ELMO2Q96JJ3 720 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 PSMG3-AS1Q96PY0 264 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 TIMM29Q9BSF4 260 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 SLC40A1Q9NP59 571 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 TMEM63CQ9P1W3 806 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 EPHA6Q9UF33 1036 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 PADI1Q9ULC6 663 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 SHOC2Q9UQ13 582 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 DNAJC16Q9Y2G8 782 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 PCDHGA6Q9Y5G7 932 aa13.66□□□□□ -0.22
CCDC84-208ENST00000534656 CREG1O75629 220 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 RFPL1O75677 317 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 CDK14O94921 469 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 MT-ND3P03897 115 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 PIRTP0C851 137 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 IDSP22304 550 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 RPL10P27635 214 aaKnown RBP13.65□□□□□ -0.22
CCDC84-208ENST00000534656 CAPZBP47756 277 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 MLLT10P55197 1068 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCDC84-208ENST00000534656 AGAP9Q5VTM2 703 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 CACHD1Q5VU97 1274 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 CYB5D1Q6P9G0 228 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 WASH2PQ6VEQ5 465 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 ASB18Q6ZVZ8 466 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 ATCAYQ86WG3 371 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 PPP1R3BQ86XI6 285 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 ZNF547Q8IVP9 402 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 IMP4Q96G21 291 aaKnown RBP13.65□□□□□ -0.22
CCDC84-208ENST00000534656 ZDHHC12Q96GR4 267 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 ZNF830Q96NB3 372 aaPredicted RBP13.65□□□□□ -0.22
CCDC84-208ENST00000534656 RNF157Q96PX1 679 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 GPR63Q9BZJ6 419 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 RAB33BQ9H082 229 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 WASH6PQ9NQA3 447 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 LNPEPQ9UIQ6 1025 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 TLK1Q9UKI8 766 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 ZNF711Q9Y462 761 aa13.65□□□□□ -0.22
CCDC84-208ENST00000534656 SPENQ96T58 3664 aaKnown RBP13.65□□□□□ -0.23
CCDC84-208ENST00000534656 PIPSLA2A3N6 862 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 CDC14CA4D256 554 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 OR52A4PA6NMU1 304 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 MTX2O75431 263 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 BPIP17213 487 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 NELFEP18615 380 aaKnown RBP13.64□□□□□ -0.23
CCDC84-208ENST00000534656 KDELR1P24390 212 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 PBX1P40424 430 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 PMS2P54278 862 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 ZBED6P86452 979 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 CDK18Q07002 472 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 DNASE1L3Q13609 305 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 GPR18Q14330 331 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 IQCB1Q15051 598 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 KHDC1Q4VXA5 237 aaKnown RBP13.64□□□□□ -0.23
CCDC84-208ENST00000534656 FAM92BQ6ZTR7 304 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 TMEM135Q86UB9 458 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 NT5DC3Q86UY8 548 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 LURAP1LQ8IV03 231 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 APLFQ8IW19 511 aaPredicted RBP13.64□□□□□ -0.23
CCDC84-208ENST00000534656 PLD5Q8N7P1 536 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 RAPGEF5Q92565 580 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 TADA1Q96BN2 335 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 CXorf40BQ96DE9 158 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 CEP41Q9BYV8 373 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 TWSG1Q9GZX9 223 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 PDE7BQ9NP56 450 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 LHX9Q9NQ69 397 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 CTTNBP2NLQ9P2B4 639 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 UVRAGQ9P2Y5 699 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 CAPN11Q9UMQ6 739 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 DOPEY2Q9Y3R5 2298 aa13.64□□□□□ -0.23
CCDC84-208ENST00000534656 ZNF106Q9H2Y7 1883 aaKnown RBP13.63□□□□□ -0.23
CCDC84-208ENST00000534656 BLACEA4D250 179 aa13.63□□□□□ -0.23
CCDC84-208ENST00000534656 SLC4A1P02730 911 aa13.63□□□□□ -0.23
CCDC84-208ENST00000534656 VCLP18206 1134 aa13.63□□□□□ -0.23
CCDC84-208ENST00000534656 DRG2P55039 364 aaKnown RBP13.63□□□□□ -0.23
CCDC84-208ENST00000534656 AP1B1Q10567 949 aa13.63□□□□□ -0.23
CCDC84-208ENST00000534656 TMEM115Q12893 351 aaPredicted RBP13.63□□□□□ -0.23
CCDC84-208ENST00000534656 SLC14A2Q15849 920 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms