RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-233	ENST00000534636	SKOR2	Q2VWA4	1001 aa	Predicted RBP	18.2	■□□□□ 0.5
CTSB-233	ENST00000534636	ZDHHC20	Q5W0Z9	365 aa		18.2	■□□□□ 0.5
CTSB-233	ENST00000534636	ATG14	Q6ZNE5	492 aa		18.2	■□□□□ 0.5
CTSB-233	ENST00000534636	TRAPPC5	Q8IUR0	188 aa		18.2	■□□□□ 0.5
CTSB-233	ENST00000534636	TTC25	Q96NG3	672 aa		18.2	■□□□□ 0.5
CTSB-233	ENST00000534636	PLEKHG4B	Q96PX9	1271 aa		18.2	■□□□□ 0.5
CTSB-233	ENST00000534636	SLC25A18	Q9H1K4	315 aa		18.2	■□□□□ 0.5
CTSB-233	ENST00000534636	POT1	Q9NUX5	634 aa		18.2	■□□□□ 0.5
CTSB-233	ENST00000534636	GEMIN8	Q9NWZ8	242 aa	Known RBP	18.2	■□□□□ 0.5
CTSB-233	ENST00000534636	FAM153A	Q9UHL3	310 aa		18.2	■□□□□ 0.5
CTSB-233	ENST00000534636	INTU	Q9ULD6	942 aa		18.2	■□□□□ 0.5
CTSB-233	ENST00000534636	PYCARD-AS1	I3L0S3	204 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	PSTPIP1	O43586	416 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	MTX2	O75431	263 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	UBXN7	O94888	489 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	WISP1	O95388	367 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	ANKRD34C	P0C6C1	535 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	COMT	P21964	271 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	PRKD1	Q15139	912 aa	Predicted RBP	18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	KAZN	Q674X7	775 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	MFSD7	Q6UXD7	560 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	TMEM26	Q6ZUK4	368 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	B4GALNT4	Q76KP1	1039 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	TADA1	Q96BN2	335 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	CXorf40B	Q96DE9	158 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	TEKT5	Q96M29	485 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	VPS35	Q96QK1	796 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	ZCCHC2	Q9C0B9	1178 aa	Known RBP	18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	TRABD	Q9H4I3	376 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	UBP1	Q9NZI7	540 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	KLHL8	Q9P2G9	620 aa	Predicted RBP	18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	HYOU1	Q9Y4L1	999 aa		18.19	■□□□□ 0.5
CTSB-233	ENST00000534636	CST8	O60676	142 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	RASSF9	O75901	435 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	STK17B	O94768	372 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	TYRP1	P17643	537 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	IDS	P22304	550 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	CDKN2B	P42772	138 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	CCR10	P46092	362 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	FOXM1	Q08050	763 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	CLCA4	Q14CN2	919 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	FAM182A	Q5T1J6	154 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	RBM12B	Q8IXT5	1001 aa	Known RBP	18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	BRSK1	Q8TDC3	778 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	P3H4	Q92791	437 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	SLC45A3	Q96JT2	553 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	C9orf72	Q96LT7	481 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	TGM7	Q96PF1	710 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	TSPY26P	Q9H489	355 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	BPIFA1	Q9NP55	256 aa		18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
CTSB-233	ENST00000534636	TOX3	O15405	576 aa	Predicted RBP	18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	ITGB6	P18564	788 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	RPL10	P27635	214 aa	Known RBP	18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	HMGCL	P35914	325 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	HAL	P42357	657 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	CSRP3	P50461	194 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	GFER	P55789	205 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	POLE2	P56282	527 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	NFKB2	Q00653	900 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	MC1R	Q01726	317 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	ABHD18	Q0P651	414 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	KCNAB2	Q13303	367 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	GLT6D1	Q7Z4J2	308 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	CCDC50	Q8IVM0	306 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	ESX1	Q8N693	406 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	VAT1	Q99536	393 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	ULBP3	Q9BZM4	244 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	TRIM4	Q9C037	500 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	APMAP	Q9HDC9	416 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	HACD3	Q9P035	362 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	SCHIP1	Q9P0W5	487 aa	Predicted RBP	18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	SAE1	Q9UBE0	346 aa	Predicted RBP	18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	SLC23A2	Q9UGH3	650 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	TMEM184B	Q9Y519	407 aa	Predicted RBP	18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	SPO11	Q9Y5K1	396 aa		18.17	■□□□□ 0.5
CTSB-233	ENST00000534636	AKR1B15	C9JRZ8	316 aa	Predicted RBP	18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	AURKA	O14965	403 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	C9	P02748	559 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	PRKAR1A	P10644	381 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	PECAM1	P16284	738 aa	Predicted RBP	18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	NFKB1	P19838	968 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	SPAM1	P38567	509 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	SLC19A1	P41440	591 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	CAPZB	P47756	277 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	WNT3A	P56704	352 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	TMEM115	Q12893	351 aa	Predicted RBP	18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	TCEAL1	Q15170	157 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	PPP2R5E	Q16537	467 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	ATP13A5	Q4VNC0	1218 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	TFDP3	Q5H9I0	405 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	AGAP9	Q5VTM2	703 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	CYB5D1	Q6P9G0	228 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	WASH2P	Q6VEQ5	465 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	SPOCD1	Q6ZMY3	1216 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	ZC3H18	Q86VM9	953 aa	Known RBP	18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	FSD1L	Q9BXM9	530 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	WASH6P	Q9NQA3	447 aa		18.16	■□□□□ 0.5
CTSB-233	ENST00000534636	TUBD1	Q9UJT1	453 aa		18.16	■□□□□ 0.5

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