RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 CTBP1Q13363 440 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 GRM2Q14416 872 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 TRIM71Q2Q1W2 868 aaKnown RBP11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 FAM98BQ52LJ0 330 aaKnown RBP11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 CERCAMQ5T4B2 595 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 HECTD2Q5U5R9 776 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 LIPMQ5VYY2 423 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 LRRTM4Q86VH4 590 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 TRPC4APQ8TEL6 797 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 ALG3Q92685 438 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 RORBQ92753 470 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 UNKQ9C0B0 810 aaKnown RBP11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 EBF3Q9H4W6 596 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 ITM2CQ9NQX7 267 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 TMEM248Q9NWD8 314 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 EURLQ9NYK6 297 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 FLRT1Q9NZU1 646 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 ANGPT4Q9Y264 503 aa11.18□□□□□ -0.62
AMBRA1-211ENST00000533727 ITGB4P16144 1822 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 HAS3O00219 553 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 ZNF217O75362 1048 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 ME2P23368 584 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 CCT8P50990 548 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 TAS2R50P59544 299 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 SERINC3Q13530 473 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 ANGPT1Q15389 498 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 PITRM1Q5JRX3 1037 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 EMC10Q5UCC4 262 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 ARMC3Q5W041 872 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 TRIM40Q6P9F5 258 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 ENPP7Q6UWV6 458 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 KLHDC7BQ96G42 594 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 TBC1D10AQ9BXI6 508 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 HS3ST4Q9Y661 456 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 H0Y858 1186 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 ALPIP09923 528 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 ATP6V1B2P21281 511 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 AGXTP21549 392 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 MTTPP55157 894 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 STX4Q12846 297 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 PLA2G4EQ3MJ16 856 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 ATXN7L2Q5T6C5 722 aaPredicted RBP11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 SYPL2Q5VXT5 272 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 ZNF621Q6ZSS3 439 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 NELL1Q92832 810 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 KXD1Q9BQD3 176 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 CCM2Q9BSQ5 444 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 UGT2B28Q9BY64 529 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 RHOBTB2Q9BYZ6 727 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 CARS2Q9HA77 564 aaKnown RBP11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 EXD2Q9NVH0 621 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 DNAJC28Q9NX36 388 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 HMGXB4Q9UGU5 601 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 SCML1Q9UN30 329 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 R3HDM2Q9Y2K5 976 aaKnown RBP11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 KLHL33A6NCF5 533 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 MRASO14807 208 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 DDX3YO15523 660 aaKnown RBP11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 SOCS5O75159 536 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 ADAMTS4O75173 837 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 KCNH1O95259 989 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 ALOX12P18054 663 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 RABGGTBP53611 331 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 SMIM11AP58511 58 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 PLIN5Q00G26 463 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 AADACL2Q6P093 401 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.17□□□□□ -0.625e-10■■□□□ 12.1
AMBRA1-211ENST00000533727 C16orf62Q7Z3J2 963 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 SIX5Q8N196 739 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 SVOPQ8N4V2 548 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 ARL10Q8N8L6 244 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 ZNF75CPQ92670 426 aaPredicted RBP11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 TOP1MTQ969P6 601 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 AZIN2Q96A70 460 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 COL26A1Q96A83 441 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 NPY6RQ99463 290 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 C6orf62Q9GZU0 229 aaPredicted RBP11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 LRMDAQ9H2I8 198 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 KLHL31Q9H511 634 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 NEK6Q9HC98 313 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 SNX15Q9NRS6 342 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 ZDHHC3Q9NYG2 299 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 ARMCX1Q9P291 453 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 HSFX1Q9UBD0 423 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 MKL2Q9ULH7 1088 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 USP54Q70EL1 1684 aa11.17□□□□□ -0.62
AMBRA1-211ENST00000533727 MYH3P11055 1940 aa11.16□□□□□ -0.62
AMBRA1-211ENST00000533727 CCR4P51679 360 aa11.16□□□□□ -0.62
AMBRA1-211ENST00000533727 KCNQ1P51787 676 aa11.16□□□□□ -0.62
AMBRA1-211ENST00000533727 NAGLUP54802 743 aa11.16□□□□□ -0.62
AMBRA1-211ENST00000533727 CHST15Q7LFX5 561 aaPredicted RBP11.16□□□□□ -0.62
AMBRA1-211ENST00000533727 ZNF554Q86TJ5 538 aa11.16□□□□□ -0.62
AMBRA1-211ENST00000533727 DHRSXQ8N5I4 330 aa11.16□□□□□ -0.62
AMBRA1-211ENST00000533727 PCDH19Q8TAB3 1148 aa11.16□□□□□ -0.62
AMBRA1-211ENST00000533727 KCTD4Q8WVF5 259 aa11.16□□□□□ -0.62
AMBRA1-211ENST00000533727 CKAP2Q8WWK9 683 aa11.16□□□□□ -0.62
AMBRA1-211ENST00000533727 OLFM1Q99784 485 aa11.16□□□□□ -0.62
AMBRA1-211ENST00000533727 GTPBP2Q9BX10 602 aaKnown RBP11.16□□□□□ -0.62
AMBRA1-211ENST00000533727 TMEM165Q9HC07 324 aa11.16□□□□□ -0.62
AMBRA1-211ENST00000533727 RAP2CQ9Y3L5 183 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms