RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 NKD1Q969G9 470 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 RBM41Q96IZ5 413 aaKnown RBP12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 CALR3Q96L12 384 aaKnown RBP12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 VPS35Q96QK1 796 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 FERMT1Q9BQL6 677 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 TIMM29Q9BSF4 260 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 UCK1Q9HA47 277 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 BPIFA1Q9NP55 256 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 FBXO8Q9NRD0 319 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 HACD3Q9P035 362 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 KLHL8Q9P2G9 620 aaPredicted RBP12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 TRHDEQ9UKU6 1024 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 PCDHA13Q9Y5I0 950 aa12.24□□□□□ -0.45
CAPRIN1-213ENST00000533562 MYO18BQ8IUG5 2567 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 LILRA5A6NI73 299 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 PDZK1P1A8MUH7 402 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 AURKAO14965 403 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 KCNJ13O60928 360 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 PPFIA2O75334 1257 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 LCA5LO95447 670 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 PECAM1P16284 738 aaPredicted RBP12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 AMD1P17707 334 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 IDSP22304 550 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 CD68P34810 354 aaPredicted RBP12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 CYLC1P35663 651 aaPredicted RBP12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 ARSDP51689 593 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 UBE2IP63279 158 aaKnown RBP12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 TMEM115Q12893 351 aaPredicted RBP12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 GTF2H3Q13889 308 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 LINC00303Q3SY05 128 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 ANKS6Q68DC2 871 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 CEACAM20Q6UY09 585 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 DAAM2Q86T65 1068 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 CACNA2D3Q8IZS8 1091 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 BMPERQ8N8U9 685 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 TC2NQ8N9U0 490 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 HTR3CQ8WXA8 447 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 EXTL1Q92935 676 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 FCRL5Q96RD9 977 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 TBC1D10AQ9BXI6 508 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 SLC23A2Q9UGH3 650 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 DNAJC16Q9Y2G8 782 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 SPO11Q9Y5K1 396 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 SDK2Q58EX2 2172 aa12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 ASH1LQ9NR48 2969 aaKnown RBP12.23□□□□□ -0.45
CAPRIN1-213ENST00000533562 hCG_1818297A0A087WSY0 165 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 J3QKU1 62 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 CAPN5O15484 640 aaPredicted RBP12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 MTX2O75431 263 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 UBXN7O94888 489 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 NFKB1P19838 968 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 HLA-DPA1P20036 260 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 MAP4P27816 1152 aaKnown RBP12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 COPS2P61201 443 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 ADCY2Q08462 1091 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 MPP3Q13368 585 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 XRCC4Q13426 336 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 SLC1A5Q15758 541 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 PPP2R5EQ16537 467 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 PLA2G4EQ3MJ16 856 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 ATP13A5Q4VNC0 1218 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 SIRPB2Q5JXA9 342 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 CCDC181Q5TID7 509 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 C11orf63Q6NUN7 778 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 KDELC1Q6UW63 502 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 ABRAXAS1Q6UWZ7 409 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 WASH2PQ6VEQ5 465 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 TMEM26Q6ZUK4 368 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 TRAPPC5Q8IUR0 188 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 RBM12BQ8IXT5 1001 aaKnown RBP12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 ZNF567Q8N184 647 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 SLC25A41Q8N5S1 370 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 EXD3Q8N9H8 876 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 PMEPA1Q969W9 287 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 EFHD1Q9BUP0 239 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 FSD1LQ9BXM9 530 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 ZCCHC2Q9C0B9 1178 aaKnown RBP12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 IL26Q9NPH9 171 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 WASH6PQ9NQA3 447 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 SCHIP1Q9P0W5 487 aaPredicted RBP12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 KLHL3Q9UH77 587 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 PILRAQ9UKJ1 303 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 PKP3Q9Y446 797 aa12.22□□□□□ -0.45
CAPRIN1-213ENST00000533562 H7C0C1 242 aa12.21□□□□□ -0.45
CAPRIN1-213ENST00000533562 APOC4-APOC2K7ER74 178 aa12.21□□□□□ -0.45
CAPRIN1-213ENST00000533562 POLR1CO15160 346 aaPredicted RBP12.21□□□□□ -0.45
CAPRIN1-213ENST00000533562 TOX3O15405 576 aaPredicted RBP12.21□□□□□ -0.45
CAPRIN1-213ENST00000533562 RAD1O60671 282 aa12.21□□□□□ -0.45
CAPRIN1-213ENST00000533562 ANXA9O76027 345 aa12.21□□□□□ -0.45
CAPRIN1-213ENST00000533562 IPO7O95373 1038 aaKnown RBP12.21□□□□□ -0.45
CAPRIN1-213ENST00000533562 APOC2P02655 101 aa12.21□□□□□ -0.45
CAPRIN1-213ENST00000533562 TYRP1P17643 537 aa12.21□□□□□ -0.45
CAPRIN1-213ENST00000533562 WT1P19544 449 aaPredicted RBP12.21□□□□□ -0.45
CAPRIN1-213ENST00000533562 RPL10P27635 214 aaKnown RBP12.21□□□□□ -0.45
CAPRIN1-213ENST00000533562 SPAM1P38567 509 aa12.21□□□□□ -0.45
CAPRIN1-213ENST00000533562 SLC19A1P41440 591 aa12.21□□□□□ -0.45
CAPRIN1-213ENST00000533562 ATP5OP48047 213 aa12.21□□□□□ -0.45
CAPRIN1-213ENST00000533562 CYP4F2P78329 520 aa12.21□□□□□ -0.45
CAPRIN1-213ENST00000533562 ITGA9Q13797 1035 aa12.21□□□□□ -0.45
CAPRIN1-213ENST00000533562 SEPT7Q16181 437 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms