RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 COL26A1Q96A83 441 aa12.32□□□□□ -0.44
RAD50-209ENST00000533482 OTUB1Q96FW1 271 aaPredicted RBP12.32□□□□□ -0.44
RAD50-209ENST00000533482 KLHL32Q96NJ5 620 aa12.32□□□□□ -0.44
RAD50-209ENST00000533482 H0Y858 1186 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 HNRNPRO43390 633 aaKnown RBP12.31□□□□□ -0.44
RAD50-209ENST00000533482 MTHFD1P11586 935 aaKnown RBP12.31□□□□□ -0.44
RAD50-209ENST00000533482 AOC1P19801 751 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 HCAR3P49019 387 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 MAPKAPK2P49137 400 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 CNTN1Q12860 1018 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 GPR17Q13304 367 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 FGD3Q5JSP0 725 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 PYCR2Q96C36 320 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 RHBGQ9H310 441 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 GIMAP4Q9NUV9 329 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 HCSTQ9UBK5 93 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 SNX6Q9UNH7 406 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 SMIM31A0A1B0GVY4 71 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 RFXANKO14593 260 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 EPHX1P07099 455 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 BNIP2Q12982 314 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 UBXN11Q5T124 520 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 TMEM214Q6NUQ4 689 aaKnown RBP12.31□□□□□ -0.44
RAD50-209ENST00000533482 OOSP2Q86WS3 158 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 ARNTL2Q8WYA1 636 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 KCNA7Q96RP8 456 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 HOPXQ9BPY8 73 aaPredicted RBP12.31□□□□□ -0.44
RAD50-209ENST00000533482 AKTIPQ9H8T0 292 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 SLC28A3Q9HAS3 691 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 ADGRE2Q9UHX3 823 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 UNCXA6NJT0 531 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 PDLIM1O00151 329 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 CDC7O00311 574 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 MAN1A2O60476 641 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 NPHS1O60500 1241 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 CYP7B1O75881 506 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 RECQL5O94762 991 aaPredicted RBP12.31□□□□□ -0.44
RAD50-209ENST00000533482 POLD2P49005 469 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 CYP4F2P78329 520 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 RUNX1T1Q06455 604 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 PPP1R3AQ16821 1122 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 RTP2Q5QGT7 225 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 TIFABQ6ZNK6 161 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 ADHFE1Q8IWW8 467 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 TXNDC5Q8NBS9 432 aaKnown RBP12.31□□□□□ -0.44
RAD50-209ENST00000533482 CANT1Q8WVQ1 401 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 TRIM8Q9BZR9 551 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 ANKRD36CQ5JPF3 1778 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 COL4A1P02462 1669 aa12.31□□□□□ -0.44
RAD50-209ENST00000533482 DCLK1O15075 740 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 FFAR2O15552 330 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 CSF2RAP15509 400 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 GCAP28676 217 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 MTPNP58546 118 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 DEPDC1Q5TB30 811 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 MSANTD2Q6P1R3 559 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 ABRAXAS1Q6UWZ7 409 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 STX19Q8N4C7 294 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 ALG2Q9H553 416 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 TRIM45Q9H8W5 580 aaPredicted RBP12.3□□□□□ -0.44
RAD50-209ENST00000533482 PNPLA3Q9NST1 481 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 AHCYL1O43865 530 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 ANXA6P08133 673 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 T-ENOLP0DO92 83 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 TJAP1Q5JTD0 557 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 EPGNQ6UW88 154 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 IFNLR1Q8IU57 520 aaPredicted RBP12.3□□□□□ -0.44
RAD50-209ENST00000533482 CSGALNACT1Q8TDX6 532 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 REEP1Q9H902 201 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 MARF1Q9Y4F3 1742 aaKnown RBP12.3□□□□□ -0.44
RAD50-209ENST00000533482 H3BN98 237 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 MATN2O00339 956 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 STK16O75716 305 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 EIF2S1P05198 315 aaKnown RBP12.3□□□□□ -0.44
RAD50-209ENST00000533482 GNPDA1P46926 289 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 HMGCS1Q01581 520 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 LYSMD3Q7Z3D4 306 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 KLK6Q92876 244 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 DGCR14Q96DF8 476 aaKnown RBP12.3□□□□□ -0.44
RAD50-209ENST00000533482 CLK4Q9HAZ1 481 aaKnown RBP12.3□□□□□ -0.44
RAD50-209ENST00000533482 ZNF37AP17032 561 aaPredicted RBP12.3□□□□□ -0.44
RAD50-209ENST00000533482 ADARP55265 1226 aaKnown RBP12.3□□□□□ -0.44
RAD50-209ENST00000533482 FBXW4P57775 412 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 USP46P62068 366 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 SLC44A4Q53GD3 710 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 PATL1Q86TB9 770 aaKnown RBP12.3□□□□□ -0.44
RAD50-209ENST00000533482 ZNF461Q8TAF7 563 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 CYB5D2Q8WUJ1 264 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 IGSF8Q969P0 613 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 AP2M1Q96CW1 435 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 SCML2Q9UQR0 700 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 TLL2Q9Y6L7 1015 aa12.3□□□□□ -0.44
RAD50-209ENST00000533482 ANKDD1BA6NHY2 528 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 GRM6O15303 877 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 HTR7P34969 479 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 RPIAP49247 311 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 NAE1Q13564 534 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 SIM2Q14190 667 aaPredicted RBP12.29□□□□□ -0.44
RAD50-209ENST00000533482 ZNF549Q6P9A3 640 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 GALNT5Q7Z7M9 940 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms