RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 TPP2P29144 1249 aaPredicted RBP16.47■□□□□ 0.23
CTSB-228ENST00000533455 BMXP51813 675 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 BEX3Q00994 111 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 TGFBIQ15582 683 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 TSNQ15631 228 aaKnown RBP16.47■□□□□ 0.23
CTSB-228ENST00000533455 CCL15Q16663 113 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 SLC44A4Q53GD3 710 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 RBM48Q5RL73 367 aaKnown RBP16.47■□□□□ 0.23
CTSB-228ENST00000533455 GLYATQ6IB77 296 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 CHST15Q7LFX5 561 aaPredicted RBP16.47■□□□□ 0.23
CTSB-228ENST00000533455 ZC3H15Q8WU90 426 aaKnown RBP16.47■□□□□ 0.23
CTSB-228ENST00000533455 RAB2BQ8WUD1 216 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 CHPT1Q8WUD6 406 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 RNF145Q96MT1 663 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 RDH12Q96NR8 316 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 MUS81Q96NY9 551 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 C1orf50Q9BV19 199 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 CCDC68Q9H2F9 335 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 FANCEQ9HB96 536 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 ZFYVE28Q9HCC9 887 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 RIC8BQ9NVN3 520 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 SCML2Q9UQR0 700 aa16.47■□□□□ 0.23
CTSB-228ENST00000533455 SOBPA7XYQ1 873 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 SOAT2O75908 522 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 ALPLP05186 524 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 THRBP10828 461 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 TYMPP19971 482 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 MAP4P27816 1152 aaKnown RBP16.46■□□□□ 0.23
CTSB-228ENST00000533455 ELK4P28324 431 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 PRDX3P30048 256 aaKnown RBP16.46■□□□□ 0.23
CTSB-228ENST00000533455 KCNC4Q03721 635 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 CBX3Q13185 183 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 SERINC3Q13530 473 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 FAM110CQ1W6H9 321 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 XAF1Q6GPH4 301 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 MON1AQ86VX9 555 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 ZC3H7AQ8IWR0 971 aaKnown RBP16.46■□□□□ 0.23
CTSB-228ENST00000533455 BRI3BPQ8WY22 251 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 SNX19Q92543 992 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 CDKN2AIPNLQ96HQ2 116 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 MAGED4Q96JG8 741 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 B3GNT3Q9Y2A9 372 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 COQ6Q9Y2Z9 468 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 MOXD2PA6NHM9 499 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 ARNTLO00327 626 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 RAP2AP10114 183 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 ZNF182P17025 639 aaPredicted RBP16.46■□□□□ 0.23
CTSB-228ENST00000533455 TRAF2Q12933 501 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 PARP15Q460N3 678 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 C6orf136Q5SQH8 315 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 DLEU7Q6UYE1 221 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 NKAPQ8N5F7 415 aaKnown RBP16.46■□□□□ 0.23
CTSB-228ENST00000533455 OR56A4Q8NGH8 313 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 PROKR1Q8TCW9 393 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 HASPINQ8TF76 798 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 NRBF2Q96F24 287 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 SUSD3Q96L08 255 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 HEBP1Q9NRV9 189 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 NLE1Q9NVX2 485 aaPredicted RBP16.46■□□□□ 0.23
CTSB-228ENST00000533455 ZNF711Q9Y462 761 aa16.46■□□□□ 0.23
CTSB-228ENST00000533455 NPEPPSL1A6NEC2 478 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 DRGXA6NNA5 263 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 CDC7O00311 574 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 GJB3O75712 270 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 BCL10O95999 233 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 ANXA6P08133 673 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 OCM2P0CE71 109 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 OCMP0CE72 109 aaPredicted RBP16.45■□□□□ 0.22
CTSB-228ENST00000533455 CES1P23141 567 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 GSTM2P28161 218 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 CASP2P42575 452 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 ZNF140P52738 457 aaPredicted RBP16.45■□□□□ 0.22
CTSB-228ENST00000533455 PRKG2Q13237 762 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 GALNT3Q14435 633 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 POLD3Q15054 466 aaPredicted RBP16.45■□□□□ 0.22
CTSB-228ENST00000533455 GTF2IRD2BQ6EKJ0 949 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 TMEM214Q6NUQ4 689 aaKnown RBP16.45■□□□□ 0.22
CTSB-228ENST00000533455 C16orf87Q6PH81 154 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 SLC2A7Q6PXP3 512 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 USP50Q70EL3 339 aaPredicted RBP16.45■□□□□ 0.22
CTSB-228ENST00000533455 FKBP9P1Q75LS8 142 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 THAP5Q7Z6K1 395 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 GTF2IRD2Q86UP8 949 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 ITIH5Q86UX2 942 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 CENPSQ8N2Z9 138 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 ATP6V0D2Q8N8Y2 350 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 HDAC2Q92769 488 aaKnown RBP16.45■□□□□ 0.22
CTSB-228ENST00000533455 IGSF8Q969P0 613 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 TMBIM1Q969X1 311 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 GLT1D1Q96MS3 346 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 SYT17Q9BSW7 474 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 MTG1Q9BT17 334 aaPredicted RBP16.45■□□□□ 0.22
CTSB-228ENST00000533455 HGH1Q9BTY7 390 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 AP5M1Q9H0R1 490 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 PSME2Q9UL46 239 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 Q9Y3F1 56 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 V9GYQ6 96 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 CHD5Q8TDI0 1954 aa16.45■□□□□ 0.22
CTSB-228ENST00000533455 UBA6A0AVT1 1052 aaPredicted RBP16.45■□□□□ 0.22
CTSB-228ENST00000533455 FUOMA2VDF0 154 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms