RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 RBM8AQ9Y5S9 174 aaKnown RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 NUBP2Q9Y5Y2 271 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 ABCC6O95255 1503 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 KIAA0586Q9BVV6 1533 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 SYCP2Q9BX26 1530 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 ZFYVE9O95405 1425 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 TROQ12816 1431 aaPredicted RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 CD109Q6YHK3 1445 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 ADGRA3Q8IWK6 1321 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 GRIN2BQ13224 1484 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 TAF1LQ8IZX4 1826 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 PMS2P1A4D2B8 440 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 LINC00862A6NCI5 91 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 TUBAL3A6NHL2 446 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 A8MX80 341 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 DDX39AO00148 427 aaKnown RBP5.47□□□□□ -1.53
CD44-236ENST00000533222 TAF4O00268 1085 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 CCRL2O00421 344 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 MAGEB2O15479 319 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 TXNL1O43396 289 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 ASNA1O43681 348 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 KRT86O43790 486 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 HS6ST1O60243 411 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 CCNB2O95067 398 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 PGM3O95394 542 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 ZBTB11O95625 1053 aaPredicted RBP5.47□□□□□ -1.53
CD44-236ENST00000533222 POMCP01189 267 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 S100A8P05109 93 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 GLAP06280 429 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 TRIM27P14373 513 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 ETS2P15036 469 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 CKMT2P17540 419 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 NCF2P19878 526 aaPredicted RBP5.47□□□□□ -1.53
CD44-236ENST00000533222 AGXTP21549 392 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 FGFR2P21802 821 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 UGT1A1P22309 533 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 KCNA5P22460 613 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 XPAP23025 273 aaPredicted RBP5.47□□□□□ -1.53
CD44-236ENST00000533222 POU1F1P28069 291 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 SERPINB1P30740 379 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 MAT2AP31153 395 aaKnown RBP5.47□□□□□ -1.53
CD44-236ENST00000533222 HOXC8P31273 242 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 FDFT1P37268 417 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 NAMPTP43490 491 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 CCR10P46092 362 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 GSTM5P46439 218 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 RGS19P49795 217 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 ENTPD1P49961 510 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 ANXA11P50995 505 aaKnown RBP5.47□□□□□ -1.53
CD44-236ENST00000533222 RENBPP51606 427 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 SLC7A2P52569 658 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 TPTEP56180 551 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 MRPS9P82933 396 aaKnown RBP5.47□□□□□ -1.53
CD44-236ENST00000533222 ATP2C1P98194 919 aaPredicted RBP5.47□□□□□ -1.53
CD44-236ENST00000533222 GALK2Q01415 458 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 HGFACQ04756 655 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 C2orf54Q08AI8 447 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 SNTA1Q13424 505 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 DYRK1AQ13627 763 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 ZNF846Q147U1 533 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 TAF5Q15542 800 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 CAMK4Q16566 473 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 PPP1R3AQ16821 1122 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 NADK2Q4G0N4 442 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 DCAF6Q58WW2 860 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 FAM171A1Q5VUB5 890 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 SLC9A4Q6AI14 798 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 NANOGP8Q6NSW7 305 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 ALKBH5Q6P6C2 394 aaKnown RBP5.47□□□□□ -1.53
CD44-236ENST00000533222 CCDC137Q6PK04 289 aaKnown RBP5.47□□□□□ -1.53
CD44-236ENST00000533222 C5orf46Q6UWT4 87 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 TRIM72Q6ZMU5 477 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 CLEC14AQ86T13 490 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 LUZP2Q86TE4 346 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 ZFAND4Q86XD8 727 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 CTAGE3PQ8IX95 158 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 THNSL1Q8IYQ7 743 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 ULK2Q8IYT8 1036 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 MICU2Q8IYU8 434 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 LGI4Q8N135 537 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 KRT78Q8N1N4 520 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 OR6Y1Q8NGX8 325 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 URGCPQ8TCY9 931 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 PHF21AQ96BD5 680 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 RHBDF1Q96CC6 855 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 RAX2Q96IS3 184 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 CCDC43Q96MW1 224 aaKnown RBP5.47□□□□□ -1.53
CD44-236ENST00000533222 ZNF558Q96NG5 402 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 DPYSL5Q9BPU6 564 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 ZNF251Q9BRH9 671 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 EFHD1Q9BUP0 239 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 TBC1D10AQ9BXI6 508 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 TMEM120AQ9BXJ8 343 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 HEMGNQ9BXL5 484 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 NFKBIZQ9BYH8 718 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 ACPTQ9BZG2 426 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 ALX4Q9H161 411 aaPredicted RBP5.47□□□□□ -1.53
CD44-236ENST00000533222 ISCUQ9H1K1 167 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 MYLK2Q9H1R3 596 aa5.47□□□□□ -1.53
CD44-236ENST00000533222 MEGF9Q9H1U4 602 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms