RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 WDR93Q6P2C0 686 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 KDELC2Q7Z4H8 507 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 ZNF438Q7Z4V0 828 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 FAM129CQ86XR2 697 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 NRSN1Q8IZ57 195 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 CCDC89Q8N998 374 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 SEC14L1Q92503 715 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 DPYSL5Q9BPU6 564 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 ZPBPQ9BS86 351 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 SPON2Q9BUD6 331 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 BRD8Q9H0E9 1235 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 PCDH9Q9HC56 1237 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 FAM114A2Q9NRY5 505 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 DKK3Q9UBP4 350 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 ASIC3Q9UHC3 531 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 MAP4K5Q9Y4K4 846 aa11.25□□□□□ -0.61
TRAPPC4-213ENST00000533149 MED13Q9UHV7 2174 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 CXorf51AA0A1B0GTR3 108 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 ILVBLA1L0T0 632 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 C5orf60A6NFR6 353 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 RASA4BC9J798 803 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 DYNC1I1O14576 645 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 RASA4O43374 803 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 RFPL1O75677 317 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 MCM3P25205 808 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 IVDP26440 423 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 CD1CP29017 333 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 GARSP41250 739 aaKnown RBP11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 GPR3P46089 330 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 RPL21P46778 160 aaKnown RBP11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 YBEYP58557 167 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 PPIDQ08752 370 aaKnown RBP11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 BIRC2Q13490 618 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 INPP5AQ14642 412 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 NR1D2Q14995 579 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 FAM182AQ5T1J6 154 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 ANKS6Q68DC2 871 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 TIPARPQ7Z3E1 657 aaKnown RBP11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 LRRC49Q8IUZ0 686 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 UNC5BQ8IZJ1 945 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 CCHCR1Q8TD31 782 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 RTP4Q96DX8 246 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 TSGA13Q96PP4 275 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 FERMT1Q9BQL6 677 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 TM6SF2Q9BZW4 377 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 SPRY4Q9C004 299 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 ATP13A1Q9HD20 1204 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 FCF1Q9Y324 198 aaKnown RBP11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 OR1A2Q9Y585 309 aa11.24□□□□□ -0.61
TRAPPC4-213ENST00000533149 ARHGAP42A6NI28 874 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 RAMP2O60895 175 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 ZNF189O75820 626 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 ZMPSTE24O75844 475 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 POP4O95707 220 aaKnown RBP11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 UGT2B4P06133 528 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 THRAP10827 490 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 TIMP2P16035 220 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 ITIH2P19823 946 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 CCNCP24863 283 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 GKP32189 559 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 ACVRL1P37023 503 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 GEMIN4P57678 1058 aaKnown RBP11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 SNRPD1P62314 119 aaKnown RBP11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 ARF5P84085 180 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 GPS1Q13098 491 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 SQSTM1Q13501 440 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 CUL1Q13616 776 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 POLD3Q15054 466 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 BRD3Q15059 726 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 WSCD2Q2TBF2 565 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 EIF2S3LQ2VIR3 472 aaKnown RBP11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 CEACAM20Q6UY09 585 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 ARHGAP36Q6ZRI8 547 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 SFTPA2Q8IWL1 248 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 OR7D4Q8NG98 312 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 OR56A4Q8NGH8 313 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 OR6K2Q8NGY2 324 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 PRR7Q8TB68 274 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 CCDC110Q8TBZ0 833 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 LRRC45Q96CN5 670 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 HDAC11Q96DB2 347 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 HMCESQ96FZ2 354 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 PDXPQ96GD0 296 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 KLHL32Q96NJ5 620 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 WRAP53Q9BUR4 548 aaKnown RBP11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 SLC29A3Q9BZD2 475 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 CYP4F12Q9HCS2 524 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 OCIAD1Q9NX40 245 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 GRHL1Q9NZI5 618 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 WHRNQ9P202 907 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 TLK1Q9UKI8 766 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 NFU1Q9UMS0 254 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 POLHQ9Y253 713 aa11.23□□□□□ -0.61
TRAPPC4-213ENST00000533149 KCNK1O00180 336 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 CACNB4O00305 520 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 TNFRSF10CO14798 259 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 MATN3O15232 486 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 INPP4BO15327 924 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 MAFKO60675 156 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 STK10O94804 968 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms