RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ACSL1P33121 698 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 CA5AP35218 305 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 PXNP49023 591 aaPredicted RBP18.31■□□□□ 0.52
SMPD1-208ENST00000533123 OCRLQ01968 901 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 ATG16L1Q676U5 607 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 ZNF549Q6P9A3 640 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 TRPM8Q7Z2W7 1104 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 TMEM151AQ8N4L1 468 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 PPP1R14CQ8TAE6 165 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 NXNL1Q96CM4 212 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 TBC1D3DA0A087WVF3 549 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 TBC1D3IA0A087WXS9 549 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 TBC1D3EA0A087X179 549 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 TBC1D3KA0A087X1G2 549 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 TBC1D3FA6NER0 549 aaPredicted RBP18.31■□□□□ 0.52
SMPD1-208ENST00000533123 TBC1D3LB9A6J9 549 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 SNNO75324 88 aaPredicted RBP18.31■□□□□ 0.52
SMPD1-208ENST00000533123 LYPLA1O75608 230 aaPredicted RBP18.31■□□□□ 0.52
SMPD1-208ENST00000533123 SBK3P0C264 359 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 TBC1D3HP0C7X1 549 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 PMLP29590 882 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 STX3Q13277 289 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 NFATC2Q13469 925 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 TBC1D3GQ6DHY5 549 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 TBC1D3CQ6IPX1 549 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 CCDC121Q6ZUS5 278 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 TAS2R42Q7RTR8 314 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 TBC1D3Q8IZP1 549 aaPredicted RBP18.31■□□□□ 0.52
SMPD1-208ENST00000533123 ZNF398Q8TD17 642 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 DTD2Q96FN9 168 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 SCYL1Q96KG9 808 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 GPR78Q96P69 363 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 RIOK2Q9BVS4 552 aaKnown RBP18.31■□□□□ 0.52
SMPD1-208ENST00000533123 TPSD1Q9BZJ3 242 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 VWA7Q9Y334 891 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 CACNA1IQ9P0X4 2223 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 H0YHG0 523 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 ITM2AO43736 263 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 OGNP20774 298 aaKnown RBP18.3■□□□□ 0.52
SMPD1-208ENST00000533123 CACNG1Q06432 222 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 SFSWAPQ12872 951 aaKnown RBP18.3■□□□□ 0.52
SMPD1-208ENST00000533123 ITGA9Q13797 1035 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 TYSND1Q2T9J0 566 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 ATP13A5Q4VNC0 1218 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 ZDHHC20Q5W0Z9 365 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 ATG14Q6ZNE5 492 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 SNX20Q7Z614 316 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 CCDC91Q7Z6B0 441 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 FSTL5Q8N475 847 aaPredicted RBP18.3■□□□□ 0.52
SMPD1-208ENST00000533123 RAB3IL1Q8TBN0 382 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 SPATA16Q9BXB7 569 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 ABCG8Q9H221 673 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 USP36Q9P275 1121 aaKnown RBP18.3■□□□□ 0.52
SMPD1-208ENST00000533123 ZFR2Q9UPR6 939 aaKnown RBP18.3■□□□□ 0.52
SMPD1-208ENST00000533123 USP34Q70CQ2 3546 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 ZNF106Q9H2Y7 1883 aaKnown RBP18.3■□□□□ 0.52
SMPD1-208ENST00000533123 TM7SF2O76062 418 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 TROVE2P10155 538 aaKnown RBP eCLIP18.3■□□□□ 0.52
SMPD1-208ENST00000533123 PTPN5P54829 565 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 LRRC8EQ6NSJ5 796 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 SDCCAG8Q86SQ7 713 aaPredicted RBP18.3■□□□□ 0.52
SMPD1-208ENST00000533123 KLK6Q92876 244 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 FAM136AQ96C01 138 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 AP2M1Q96CW1 435 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 C7orf26Q96N11 449 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 TSNARE1Q96NA8 513 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 MYCBPQ99417 103 aaPredicted RBP18.3■□□□□ 0.52
SMPD1-208ENST00000533123 BTBD1Q9H0C5 482 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 IGSF5Q9NSI5 407 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 DLGAP2Q9P1A6 1054 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 MARCOQ9UEW3 520 aaPredicted RBP18.3■□□□□ 0.52
SMPD1-208ENST00000533123 CYP8B1Q9UNU6 501 aa18.3■□□□□ 0.52
SMPD1-208ENST00000533123 A0A087X1B8 175 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 A0A0G2JND7 137 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 RGSL1A5PLK6 1076 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 KLHL2O95198 593 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 ITGALP20701 1170 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 ARRB2P32121 409 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 DCDC1P59894 354 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 CREB5Q02930 508 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 CSHL1Q14406 222 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 DBN1Q16643 649 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 HENMT1Q5T8I9 393 aaKnown RBP18.29■□□□□ 0.52
SMPD1-208ENST00000533123 TMEM207Q6UWW9 146 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 NRSN1Q8IZ57 195 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 PELI3Q8N2H9 469 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 HEXDCQ8WVB3 486 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 ANKRD49Q8WVL7 239 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 NUS1Q96E22 293 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 TRIM55Q9BYV6 548 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 GPAMQ9HCL2 828 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 XPR1Q9UBH6 696 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 A0A1W2PQU0 124 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 RNGTTO60942 597 aaKnown RBP18.29■□□□□ 0.52
SMPD1-208ENST00000533123 PAK4O96013 591 aaPredicted RBP18.29■□□□□ 0.52
SMPD1-208ENST00000533123 KITP10721 976 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 RALBP11234 206 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 COL6A2P12110 1019 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 CXCL12P48061 93 aa18.29■□□□□ 0.52
SMPD1-208ENST00000533123 RPS21P63220 83 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms