RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ZNF547Q8IVP9 402 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 KLHDC8BQ8IXV7 354 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 LRRC45Q96CN5 670 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 TBL1YQ9BQ87 522 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 TIMM29Q9BSF4 260 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 OSGEPL1Q9H4B0 414 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 STN1Q9H668 368 aaKnown RBP29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 UGT1A7Q9HAW7 530 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 UGT1A10Q9HAW8 530 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 UGT1A8Q9HAW9 530 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 PRDM8Q9NQV8 689 aa29.87■■■□□ 2.37
SSSCA1-207ENST00000533115 OR5K4A6NMS3 321 aa29.86■■■□□ 2.37
SSSCA1-207ENST00000533115 GAPDHSO14556 408 aaPredicted RBP29.86■■■□□ 2.37
SSSCA1-207ENST00000533115 GPLD1P80108 840 aa29.86■■■□□ 2.37
SSSCA1-207ENST00000533115 GTF2H3Q13889 308 aa29.86■■■□□ 2.37
SSSCA1-207ENST00000533115 LDLRAP1Q5SW96 308 aa29.86■■■□□ 2.37
SSSCA1-207ENST00000533115 ZNF761Q86XN6 746 aaPredicted RBP29.86■■■□□ 2.37
SSSCA1-207ENST00000533115 KCNE4Q8WWG9 221 aa29.86■■■□□ 2.37
SSSCA1-207ENST00000533115 TTC25Q96NG3 672 aa29.86■■■□□ 2.37
SSSCA1-207ENST00000533115 CMKLR1Q99788 373 aa29.86■■■□□ 2.37
SSSCA1-207ENST00000533115 TMEM121Q9BTD3 319 aa29.86■■■□□ 2.37
SSSCA1-207ENST00000533115 ARNT2Q9HBZ2 717 aa29.86■■■□□ 2.37
SSSCA1-207ENST00000533115 GPR39O43194 453 aa29.85■■■□□ 2.37
SSSCA1-207ENST00000533115 JMJD7P0C870 316 aa29.85■■■□□ 2.37
SSSCA1-207ENST00000533115 GDF10P55107 478 aa29.85■■■□□ 2.37
SSSCA1-207ENST00000533115 TLE3Q04726 772 aa29.85■■■□□ 2.37
SSSCA1-207ENST00000533115 MSLNQ13421 630 aaPredicted RBP29.85■■■□□ 2.37
SSSCA1-207ENST00000533115 SPARCL1Q14515 664 aa29.85■■■□□ 2.37
SSSCA1-207ENST00000533115 DENND5AQ6IQ26 1287 aa29.85■■■□□ 2.37
SSSCA1-207ENST00000533115 LRRC8AQ8IWT6 810 aa29.85■■■□□ 2.37
SSSCA1-207ENST00000533115 DDHD1Q8NEL9 900 aa29.85■■■□□ 2.37
SSSCA1-207ENST00000533115 OR4K2Q8NGD2 314 aa29.85■■■□□ 2.37
SSSCA1-207ENST00000533115 SH3KBP1Q96B97 665 aa29.85■■■□□ 2.37
SSSCA1-207ENST00000533115 DPYSL5Q9BPU6 564 aa29.85■■■□□ 2.37
SSSCA1-207ENST00000533115 ZCCHC2Q9C0B9 1178 aaKnown RBP29.85■■■□□ 2.37
SSSCA1-207ENST00000533115 PISDQ9UG56 409 aa29.85■■■□□ 2.37
SSSCA1-207ENST00000533115 DNAJC16Q9Y2G8 782 aa29.85■■■□□ 2.37
SSSCA1-207ENST00000533115 IGHV5-10-1A0A0J9YXX1 117 aa29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 AGRPO00253 132 aa29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 METTL18O95568 372 aa29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 CRTAMO95727 393 aa29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 HOXB3P14651 431 aaPredicted RBP29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 CA5AP35218 305 aa29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 LIMK2P53671 638 aa29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 NFATC2Q13469 925 aa29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 ZNF662Q6ZS27 426 aa29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 TRAPPC5Q8IUR0 188 aa29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 OR4D9Q8NGE8 314 aa29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 AHCYL2Q96HN2 611 aaKnown RBP29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 DPH1Q9BZG8 443 aa29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 SMOXQ9NWM0 555 aa29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 FEZ2Q9UHY8 353 aaPredicted RBP29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 KCTD3Q9Y597 815 aa29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 PCDHGA7Q9Y5G6 932 aa29.84■■■□□ 2.37
SSSCA1-207ENST00000533115 BPTFQ12830 3046 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 PRR19A6NJB7 356 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 PRAMEF1O95521 474 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 CCDC175P0C221 793 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 CSF2RBP32927 897 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 PDE1BQ01064 536 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 CFHR1Q03591 330 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 C16orf72Q14CZ0 275 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 GPRC6AQ5T6X5 926 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 MEI1Q5TIA1 1274 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 KCTD11Q693B1 232 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 C11orf96Q7Z7L8 435 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 AVL9Q8NBF6 648 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 OR10G6Q8NH81 332 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 ZNF398Q8TD17 642 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 ATG4AQ8WYN0 398 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 CCDC97Q96F63 343 aaPredicted RBP29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 CCDC74BQ96LY2 380 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 AKAP7Q9P0M2 348 aaPredicted RBP29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 SCHIP1Q9P0W5 487 aaPredicted RBP29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 CPNE7Q9UBL6 633 aa29.83■■■□□ 2.37
SSSCA1-207ENST00000533115 ITIH1P19827 911 aa29.82■■■□□ 2.36
SSSCA1-207ENST00000533115 TRA2AQ13595 282 aaKnown RBP eCLIP29.82■■■□□ 2.36
SSSCA1-207ENST00000533115 RPS6KA1Q15418 735 aa29.82■■■□□ 2.36
SSSCA1-207ENST00000533115 P3H1Q32P28 736 aa29.82■■■□□ 2.36
SSSCA1-207ENST00000533115 JAMLQ86YT9 394 aa29.82■■■□□ 2.36
SSSCA1-207ENST00000533115 RASGEF1AQ8N9B8 481 aa29.82■■■□□ 2.36
SSSCA1-207ENST00000533115 LDHAL6BQ9BYZ2 381 aaPredicted RBP29.82■■■□□ 2.36
SSSCA1-207ENST00000533115 FRMD8P1Q9BZ68 369 aaPredicted RBP29.82■■■□□ 2.36
SSSCA1-207ENST00000533115 LZTFL1Q9NQ48 299 aa29.82■■■□□ 2.36
SSSCA1-207ENST00000533115 FKBPLQ9UIM3 349 aa29.82■■■□□ 2.36
SSSCA1-207ENST00000533115 ZNF106Q9H2Y7 1883 aaKnown RBP29.81■■■□□ 2.36
SSSCA1-207ENST00000533115 PTPRQQ9UMZ3 2332 aa29.81■■■□□ 2.36
SSSCA1-207ENST00000533115 HGSO14964 777 aaPredicted RBP29.81■■■□□ 2.36
SSSCA1-207ENST00000533115 DUX1O43812 170 aa29.81■■■□□ 2.36
SSSCA1-207ENST00000533115 VCLP18206 1134 aa29.81■■■□□ 2.36
SSSCA1-207ENST00000533115 XRCC1P18887 633 aaPredicted RBP29.81■■■□□ 2.36
SSSCA1-207ENST00000533115 SLC5A2P31639 672 aa29.81■■■□□ 2.36
SSSCA1-207ENST00000533115 PPM1FP49593 454 aaPredicted RBP29.81■■■□□ 2.36
SSSCA1-207ENST00000533115 UBE2IP63279 158 aaKnown RBP29.81■■■□□ 2.36
SSSCA1-207ENST00000533115 TMEM71Q6P5X7 295 aa29.81■■■□□ 2.36
SSSCA1-207ENST00000533115 SLC13A5Q86YT5 568 aaPredicted RBP29.81■■■□□ 2.36
SSSCA1-207ENST00000533115 RCBTB1Q8NDN9 531 aa29.81■■■□□ 2.36
SSSCA1-207ENST00000533115 RTP4Q96DX8 246 aa29.81■■■□□ 2.36
SSSCA1-207ENST00000533115 ALS2CR12Q96Q35 445 aa29.81■■■□□ 2.36
SSSCA1-207ENST00000533115 ZMYND15Q9H091 742 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms