RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 CCDC162PA2VCL2 907 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 FAM149AA5PLN7 773 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 B4DGG1 531 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 NTN3O00634 580 aaPredicted RBP13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 TMEM63AO94886 807 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 ECEL1O95672 775 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 ACP5P13686 325 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 ZNF7P17097 686 aaPredicted RBP13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 MC4RP32245 332 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 FOXN2P32314 431 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 LMAN1P49257 510 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 MAZP56270 477 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 NR1D2Q14995 579 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 GPR33Q49SQ1 333 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 HES3Q5TGS1 186 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 ZNF438Q7Z4V0 828 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 LRRTM4Q86VH4 590 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 NXPE1Q8N323 547 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 DCBLD1Q8N8Z6 715 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 NAT14Q8WUY8 206 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 NAT6Q93015 286 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 TIMM29Q9BSF4 260 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 CHRAC1Q9NRG0 131 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 TREX1Q9NSU2 369 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 KCNK6Q9Y257 313 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 CHD8Q9HCK8 2581 aa13.74□□□□□ -0.21
TSPAN4-220ENST00000532375 A0A1W2PQM1 296 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 CCDC78A2IDD5 438 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 HEATR9A2RTY3 570 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 OR51F1A6NGY5 319 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 KMOO15229 486 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 PPM1DO15297 605 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 B4GAT1O43505 415 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 NUDT21O43809 227 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 PNLIPP16233 465 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 GLB1P16278 677 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 MAGEA3P43357 314 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 NPY2RP49146 381 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 SESN2P58004 480 aaPredicted RBP13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 CRADDP78560 199 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 SEPT6Q14141 434 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 SKIDA1Q1XH10 827 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 ZNF658BQ4V348 819 aaPredicted RBP13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 PCID2Q5JVF3 399 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 IYDQ6PHW0 289 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 TMEM220Q6QAJ8 160 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 CRTC3Q6UUV7 619 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 AGGF1Q8N302 714 aaeCLIP13.73□□□□□ -0.211e-7■■■■□ 23.7
TSPAN4-220ENST00000532375 SFRP1Q8N474 314 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 NAT8LQ8N9F0 302 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 MCUQ8NE86 351 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 OR6C4Q8NGE1 309 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 PEX13Q92968 403 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 HDAC10Q969S8 669 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 CCDC74AQ96AQ1 378 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 SGF29Q96ES7 293 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 SGSM3Q96HU1 749 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 CCDC3Q9BQI4 270 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 KLC4Q9NSK0 619 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 SCHIP1Q9P0W5 487 aaPredicted RBP13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 RNF14Q9UBS8 474 aa13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 DNMT3AQ9Y6K1 912 aaPredicted RBP13.73□□□□□ -0.21
TSPAN4-220ENST00000532375 ACACBO00763 2458 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 GOLGA6L10A0A0M3HER8 536 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 AVILO75366 819 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 POP7O75817 140 aaKnown RBP13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 MT-CO3P00414 261 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 BRAFP15056 766 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 ITGALP20701 1170 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 MGAT1P26572 445 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 ARNTP27540 789 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 FASLGP48023 281 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 CACNG1Q06432 222 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 DMPKQ09013 629 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 TARDBPQ13148 414 aaKnown RBP eCLIP13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 PTK6Q13882 451 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 ABRAXAS1Q6UWZ7 409 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 WASH2PQ6VEQ5 465 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 SYT10Q6XYQ8 523 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 FAM83HQ6ZRV2 1179 aaPredicted RBP13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 SERPINA9Q86WD7 417 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 GALNT15Q8N3T1 639 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 BEND7Q8N7W2 519 aaPredicted RBP13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 GDAP1Q8TB36 358 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 SLC37A2Q8TED4 501 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 ULK4Q96C45 1275 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 LINC00615Q96LM1 132 aaPredicted RBP13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 KIFC1Q9BW19 673 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 IL22Q9GZX6 179 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 WASH6PQ9NQA3 447 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 PRDM8Q9NQV8 689 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 EVA1BQ9NVM1 165 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 SYBUQ9NX95 663 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 ZDHHC3Q9NYG2 299 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 LRIT1Q9P2V4 623 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 SLC30A1Q9Y6M5 507 aa13.72□□□□□ -0.21
TSPAN4-220ENST00000532375 ASPMQ8IZT6 3477 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 TRBV23OR9-2A0A075B6M9 112 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 OR2AG2A6NM03 316 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms