RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 SUPT3HB4E1H0 165 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 BTN3A1O00481 513 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 CCL22O00626 93 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 UBDO15205 165 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 DCXO43602 365 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 SUPT3HO75486 399 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 CLDN7O95471 211 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 ESRRBO95718 433 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 RPS17P08708 135 aaKnown RBP12.15□□□□□ -0.46
CHD7-211ENST00000532149 UROSP10746 265 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 COX4I1P13073 169 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 MTHFD2P13995 350 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 GJA1P17302 382 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 ARRB2P32121 409 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 SPINT3P49223 89 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 CLCQ05315 142 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 KDSRQ06136 332 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 ZNF33BQ06732 778 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 SP140Q13342 867 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 SLC9B1Q4ZJI4 515 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 UNC50Q53HI1 259 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 COQ5Q5HYK3 327 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 CTSL3PQ5NE16 218 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 PLEKHS1Q5SXH7 462 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 SULT1C3Q6IMI6 304 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 DPY19L3Q6ZPD9 716 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 FRA10AC1Q70Z53 315 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 TTC7BQ86TV6 843 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 TREML1Q86YW5 311 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 GALNT13Q8IUC8 556 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 FAM9CQ8IZT9 166 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 KIF2BQ8N4N8 673 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 ZBTB2Q8N680 514 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 KYQ8NBH2 561 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 PDPRQ8NCN5 879 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 OR2A12Q8NGT7 310 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 PTERQ96BW5 349 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 PHF21BQ96EK2 531 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 LINGO1Q96FE5 620 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 DCUN1D1Q96GG9 259 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 VPS35Q96QK1 796 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 ZNF382Q96SR6 550 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 NUF2Q9BZD4 464 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 ZNF385DQ9H6B1 395 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 EPHX3Q9H6B9 360 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 RNPEPL1Q9HAU8 725 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 RIC8BQ9NVN3 520 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 ARMCX1Q9P291 453 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 DEC1Q9P2X7 70 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 STOML1Q9UBI4 398 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 SUN2Q9UH99 717 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 IL36AQ9UHA7 158 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 MED16Q9Y2X0 877 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 ALPK3Q96L96 1907 aa12.15□□□□□ -0.46
CHD7-211ENST00000532149 EDDM13A0A1B0GTR0 161 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.14□□□□□ -0.47
CHD7-211ENST00000532149 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.14□□□□□ -0.47
CHD7-211ENST00000532149 UPK3BL1B0FP48 263 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 UPK3BL2E5RIL1 263 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 IFRD1O00458 451 aaPredicted RBP12.14□□□□□ -0.47
CHD7-211ENST00000532149 SDHDO14521 159 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 CCNT2O60583 730 aaKnown RBP12.14□□□□□ -0.47
CHD7-211ENST00000532149 KATNA1O75449 491 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 CRCPO75575 148 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 TSPAN12O95859 305 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 C8GP07360 202 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 CISD3P0C7P0 127 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 MPC1LP0DKB6 136 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 CTPS1P17812 591 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 FSHRP23945 695 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 HNMTP50135 292 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 PLOD1Q02809 727 aaPredicted RBP12.14□□□□□ -0.47
CHD7-211ENST00000532149 KCNC3Q14003 757 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 PTPRCAPQ14761 206 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 OR4D1Q15615 310 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 PFKFB4Q16877 469 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 SLC5A9Q2M3M2 681 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 EML3Q32P44 896 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 SETMARQ53H47 684 aaPredicted RBP12.14□□□□□ -0.47
CHD7-211ENST00000532149 LDLRAP1Q5SW96 308 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 GPRC6AQ5T6X5 926 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 NXNQ6DKJ4 435 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 OGFOD2Q6N063 350 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 HACD2Q6Y1H2 254 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 ZNF765Q7L2R6 523 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 CYP2U1Q7Z449 544 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 PIM3Q86V86 326 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 PELI3Q8N2H9 469 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 TRAM1L1Q8N609 369 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 PCYOX1LQ8NBM8 494 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 RBM15BQ8NDT2 890 aaKnown RBP12.14□□□□□ -0.47
CHD7-211ENST00000532149 RIN3Q8TB24 985 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 ZNF483Q8TF39 744 aaPredicted RBP12.14□□□□□ -0.47
CHD7-211ENST00000532149 FRS2Q8WU20 508 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 BHMTQ93088 406 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 UTP4Q969X6 686 aaKnown RBP12.14□□□□□ -0.47
CHD7-211ENST00000532149 RAB7BQ96AH8 199 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 SGF29Q96ES7 293 aa12.14□□□□□ -0.47
CHD7-211ENST00000532149 RPL10LQ96L21 214 aaKnown RBP12.14□□□□□ -0.47
CHD7-211ENST00000532149 FAM83CQ9BQN1 747 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms