RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 PPIDQ08752 370 aaKnown RBP5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 AP1B1Q10567 949 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 SLC14A1Q13336 389 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 TAZQ16635 292 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 HLA-BQ31612 363 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 PPM1JQ5JR12 505 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 PSAPL1Q6NUJ1 521 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 BZW1Q7L1Q6 419 aaKnown RBP5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 DGLUCYQ7Z3D6 616 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 PEX26Q7Z412 305 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 IQCHQ86VS3 1027 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 ZSWIM9Q86XI8 627 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 LRRC8AQ8IWT6 810 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 CMIPQ8IY22 773 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 CCDC13Q8IYE1 715 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 SYCE1Q8N0S2 351 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 VWA5B2Q8N398 1253 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 PRR18Q8N4B5 295 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 RNF10Q8N5U6 811 aaKnown RBP5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 LRRC57Q8N9N7 239 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 MFSD2AQ8NA29 543 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 CXorf40AQ8TE69 158 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 PDCD6IPQ8WUM4 868 aaKnown RBP5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 MAML1Q92585 1016 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 ANP32BQ92688 251 aaKnown RBP5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 P3H4Q92791 437 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 ATP6V1E2Q96A05 226 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 HDAC11Q96DB2 347 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 ECHDC3Q96DC8 303 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 KLHDC7BQ96G42 594 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 RSRC1Q96IZ7 334 aaKnown RBP5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 LGMNQ99538 433 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 MYOCQ99972 504 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 SEMA3CQ99985 751 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 TREX2Q9BQ50 279 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 WRAP53Q9BUR4 548 aaKnown RBP5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 C1QTNF7Q9BXJ2 289 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 TSGA10Q9BZW7 698 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 NRSN2Q9GZP1 204 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 POLR1EQ9GZS1 481 aaKnown RBP5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 BRD8Q9H0E9 1235 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 GAREM1Q9H706 876 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 IL21RQ9HBE5 538 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 NOD2Q9HC29 1040 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 NT5MQ9NPB1 228 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 GDF3Q9NR23 364 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 GPATCH2Q9NW75 528 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 IRAK4Q9NWZ3 460 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 SAE1Q9UBE0 346 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 TRIM10Q9UDY6 481 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 AMACRQ9UHK6 382 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 AMFRQ9UKV5 643 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 ZFR2Q9UPR6 939 aaKnown RBP5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 PCDHA3Q9Y5H8 950 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 PLXND1Q9Y4D7 1925 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 EP300Q09472 2414 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 GVINP1Q7Z2Y8 2422 aa5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 RIF1Q5UIP0 2472 aaKnown RBP5.79□□□□□ -1.48
HMGB1P42-201ENST00000532126 DOCK4Q8N1I0 1966 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 ABCA7Q8IZY2 2146 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 VPS13AQ96RL7 3174 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 FAM186AA6NE01 2351 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 hCG_1818297A0A087WSY0 165 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 A0A0U1RQJ8 604 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 ADARB2-AS1A8MUL3 147 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 MIF4GDA9UHW6 222 aaKnown RBP5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 FAM47E-STBD1D6RA91 191 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 F5H0A9 414 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 H0Y8X5 98 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 TRAFD1O14545 582 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 KCNK3O14649 394 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 FPGTO14772 594 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 TM4SF5O14894 197 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 MTSS1O43312 755 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 HTRA2O43464 458 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 FRS3O43559 492 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 KRT86O43790 486 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 MAGEC1O60732 1142 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 RGS9O75916 674 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 FTCDO95954 541 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 JCHAINP01591 159 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 WNT1P04628 370 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 PRKCGP05129 697 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 HLA-DQB2P05538 268 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 CCDC175P0C221 793 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 THEGLP0DJG4 465 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 PECAM1P16284 738 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 ENPP1P22413 925 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 CA4P22748 312 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 PTPRZ1P23471 2315 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 CD40P25942 277 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 NFKBIAP25963 317 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 CTNNA2P26232 953 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 ADH6P28332 368 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 MMP12P39900 470 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 CTSKP43235 329 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 MTNR1BP49286 362 aa5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 ARRB1P49407 418 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P42-201ENST00000532126 PEX5P50542 639 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms