RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 CDK14O94921 469 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 VIPP01282 170 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 ANKRD34CP0C6C1 535 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 NFKB1P19838 968 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 HMGCLP35914 325 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 SLC19A1P41440 591 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 WNT3AP56704 352 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 TBX2Q13207 712 aaPredicted RBP16.57■□□□□ 0.24
CPSF1-207ENST00000531727 KHDC1Q4VXA5 237 aaKnown RBP16.57■□□□□ 0.24
CPSF1-207ENST00000531727 TFDP3Q5H9I0 405 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 KAZNQ674X7 775 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 KDELC1Q6UW63 502 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 TMEM26Q6ZUK4 368 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 PRICKLE2Q7Z3G6 844 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 ZNF547Q8IVP9 402 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 TRIM48Q8IWZ4 208 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 NLGN4XQ8N0W4 816 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 RNF214Q8ND24 703 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 NLGN4YQ8NFZ3 816 aaPredicted RBP16.57■□□□□ 0.24
CPSF1-207ENST00000531727 CTRCQ99895 268 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 TRABDQ9H4I3 376 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 APMAPQ9HDC9 416 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 BPIFA1Q9NP55 256 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 OGFRQ9NZT2 677 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 DNAJC16Q9Y2G8 782 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 TMEM184BQ9Y519 407 aaPredicted RBP16.57■□□□□ 0.24
CPSF1-207ENST00000531727 ALG6Q9Y672 507 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 ZNF106Q9H2Y7 1883 aaKnown RBP16.56■□□□□ 0.24
CPSF1-207ENST00000531727 BOD1L1Q8NFC6 3051 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 ZNF891A8MT65 544 aaPredicted RBP16.56■□□□□ 0.24
CPSF1-207ENST00000531727 PDZK1P1A8MUH7 402 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 CAPN5O15484 640 aaPredicted RBP16.56■□□□□ 0.24
CPSF1-207ENST00000531727 EPOP01588 193 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 C9P02748 559 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 BRAFP15056 766 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 MAP4P27816 1152 aaKnown RBP16.56■□□□□ 0.24
CPSF1-207ENST00000531727 GFERP55789 205 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 ADCY2Q08462 1091 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 CLCA4Q14CN2 919 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 NOMO1Q15155 1222 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 LLGL1Q15334 1064 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 SEPT7Q16181 437 aaKnown RBP16.56■□□□□ 0.24
CPSF1-207ENST00000531727 ATP13A5Q4VNC0 1218 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 SIRPB2Q5JXA9 342 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 ABRAXAS1Q6UWZ7 409 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 TTC30BQ8N4P2 665 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 P3H4Q92791 437 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 C9orf72Q96LT7 481 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 FCRL5Q96RD9 977 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 POT1Q9NUX5 634 aa16.56■□□□□ 0.24
CPSF1-207ENST00000531727 SIDT1Q9NXL6 827 aaKnown RBP16.56■□□□□ 0.24
CPSF1-207ENST00000531727 KLHL8Q9P2G9 620 aaPredicted RBP16.56■□□□□ 0.24
CPSF1-207ENST00000531727 hCG_1818297A0A087WSY0 165 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 STK17BO94768 372 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 UBXN7O94888 489 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 TYRP1P17643 537 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 MAGEA1P43355 309 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 TNNT3P45378 269 aaPredicted RBP16.55■□□□□ 0.24
CPSF1-207ENST00000531727 TMEM115Q12893 351 aaPredicted RBP16.55■□□□□ 0.24
CPSF1-207ENST00000531727 GTF2H3Q13889 308 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 AGAP9Q5VTM2 703 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 ZDHHC20Q5W0Z9 365 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 BORAQ6PGQ7 559 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 WASH2PQ6VEQ5 465 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 TIPARPQ7Z3E1 657 aaKnown RBP16.55■□□□□ 0.24
CPSF1-207ENST00000531727 C11orf96Q7Z7L8 435 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 ZC3H18Q86VM9 953 aaKnown RBP16.55■□□□□ 0.24
CPSF1-207ENST00000531727 KATNAL2Q8IYT4 538 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 ZNF567Q8N184 647 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 DTX3LQ8TDB6 740 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 KIAA1143Q96AT1 154 aaPredicted RBP16.55■□□□□ 0.24
CPSF1-207ENST00000531727 OXNAD1Q96HP4 312 aaPredicted RBP16.55■□□□□ 0.24
CPSF1-207ENST00000531727 SLC45A3Q96JT2 553 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 MRGPRX2Q96LB1 330 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 VAT1Q99536 393 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 ADNPQ9H2P0 1102 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 GOLPH3Q9H4A6 298 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 GPN2Q9H9Y4 310 aaPredicted RBP16.55■□□□□ 0.24
CPSF1-207ENST00000531727 IL26Q9NPH9 171 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 WASH6PQ9NQA3 447 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 GEMIN8Q9NWZ8 242 aaKnown RBP16.55■□□□□ 0.24
CPSF1-207ENST00000531727 HACD3Q9P035 362 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 SLC30A1Q9Y6M5 507 aa16.55■□□□□ 0.24
CPSF1-207ENST00000531727 LOC101059948A0A1B0GTJ6 334 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 PYCARD-AS1I3L0S3 204 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 POLR1CO15160 346 aaPredicted RBP16.54■□□□□ 0.24
CPSF1-207ENST00000531727 TOX3O15405 576 aaPredicted RBP16.54■□□□□ 0.24
CPSF1-207ENST00000531727 PPFIA2O75334 1257 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 ZRANB2O95218 330 aaKnown RBP eCLIP16.54■□□□□ 0.24
CPSF1-207ENST00000531727 AMD1P17707 334 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 VCLP18206 1134 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 IDSP22304 550 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 RPL10P27635 214 aaKnown RBP16.54■□□□□ 0.24
CPSF1-207ENST00000531727 SPAM1P38567 509 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 CHRNA4P43681 627 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 ABHD18Q0P651 414 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 SLC1A5Q15758 541 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 PID1Q7Z2X4 250 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 TRAPPC5Q8IUR0 188 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 RBM12BQ8IXT5 1001 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms