RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 SAT1P21673 171 aa17.44■□□□□ 0.38
CTSB-222ENST00000531551 C21orf59P57076 290 aa17.44■□□□□ 0.38
CTSB-222ENST00000531551 CASP8Q14790 479 aa17.44■□□□□ 0.38
CTSB-222ENST00000531551 PTRHD1Q6GMV3 140 aaKnown RBP17.44■□□□□ 0.38
CTSB-222ENST00000531551 TMEM220Q6QAJ8 160 aa17.44■□□□□ 0.38
CTSB-222ENST00000531551 TRAPPC5Q8IUR0 188 aa17.44■□□□□ 0.38
CTSB-222ENST00000531551 SYT12Q8IV01 421 aa17.44■□□□□ 0.38
CTSB-222ENST00000531551 GPATCH11Q8N954 259 aa17.44■□□□□ 0.38
CTSB-222ENST00000531551 OR56A4Q8NGH8 313 aa17.44■□□□□ 0.38
CTSB-222ENST00000531551 SCG3Q8WXD2 468 aaKnown RBP17.44■□□□□ 0.38
CTSB-222ENST00000531551 SKA1Q96BD8 255 aa17.44■□□□□ 0.38
CTSB-222ENST00000531551 NDNQ99608 321 aa17.44■□□□□ 0.38
CTSB-222ENST00000531551 SUSD2Q9UGT4 822 aa17.44■□□□□ 0.38
CTSB-222ENST00000531551 IGLV3-16A0A075B6K0 115 aa17.43■□□□□ 0.38
CTSB-222ENST00000531551 VEGFDO43915 354 aa17.43■□□□□ 0.38
CTSB-222ENST00000531551 CEACAM5P06731 702 aa17.43■□□□□ 0.38
CTSB-222ENST00000531551 IVLP07476 585 aa17.43■□□□□ 0.38
CTSB-222ENST00000531551 HOXC4P09017 264 aaPredicted RBP17.43■□□□□ 0.38
CTSB-222ENST00000531551 ITGB6P18564 788 aa17.43■□□□□ 0.38
CTSB-222ENST00000531551 CTSCP53634 463 aa17.43■□□□□ 0.38
CTSB-222ENST00000531551 TEAD4Q15561 434 aa17.43■□□□□ 0.38
CTSB-222ENST00000531551 ZNF542PQ5EBM4 170 aa17.43■□□□□ 0.38
CTSB-222ENST00000531551 GRTP1Q5TC63 336 aa17.43■□□□□ 0.38
CTSB-222ENST00000531551 CRTC3Q6UUV7 619 aa17.43■□□□□ 0.38
CTSB-222ENST00000531551 BEND7Q8N7W2 519 aaPredicted RBP17.43■□□□□ 0.38
CTSB-222ENST00000531551 EPS8L3Q8TE67 593 aaKnown RBP17.43■□□□□ 0.38
CTSB-222ENST00000531551 SLC44A1Q8WWI5 657 aa17.43■□□□□ 0.38
CTSB-222ENST00000531551 ATOH1Q92858 354 aaPredicted RBP17.43■□□□□ 0.38
CTSB-222ENST00000531551 TSACCQ96A04 125 aaPredicted RBP17.43■□□□□ 0.38
CTSB-222ENST00000531551 FAM136AQ96C01 138 aa17.43■□□□□ 0.38
CTSB-222ENST00000531551 CYP4F12Q9HCS2 524 aa17.43■□□□□ 0.38
CTSB-222ENST00000531551 FGF22Q9HCT0 170 aa17.43■□□□□ 0.38
CTSB-222ENST00000531551 KLQ9UEF7 1012 aa17.43■□□□□ 0.38
CTSB-222ENST00000531551 ZNHIT2Q9UHR6 403 aa17.43■□□□□ 0.38
CTSB-222ENST00000531551 THADAQ6YHU6 1953 aa17.42■□□□□ 0.38
CTSB-222ENST00000531551 ZNF106Q9H2Y7 1883 aaKnown RBP17.42■□□□□ 0.38
CTSB-222ENST00000531551 IQCF5A8MTL0 148 aa17.42■□□□□ 0.38
CTSB-222ENST00000531551 PRR5-ARHGAP8B1AHC4 643 aa17.42■□□□□ 0.38
CTSB-222ENST00000531551 MAGEC1O60732 1142 aa17.42■□□□□ 0.38
CTSB-222ENST00000531551 OR56A5P0C7T3 313 aa17.42■□□□□ 0.38
CTSB-222ENST00000531551 SPRP35270 261 aaPredicted RBP17.42■□□□□ 0.38
CTSB-222ENST00000531551 MACC1Q6ZN28 852 aa17.42■□□□□ 0.38
CTSB-222ENST00000531551 IQCHQ86VS3 1027 aa17.42■□□□□ 0.38
CTSB-222ENST00000531551 ZC3HC1Q86WB0 502 aaKnown RBP17.42■□□□□ 0.38
CTSB-222ENST00000531551 ZIM3Q96PE6 472 aa17.42■□□□□ 0.38
CTSB-222ENST00000531551 RBBP8Q99708 897 aa17.42■□□□□ 0.38
CTSB-222ENST00000531551 P2RY12Q9H244 342 aa17.42■□□□□ 0.38
CTSB-222ENST00000531551 CARS2Q9HA77 564 aaKnown RBP17.42■□□□□ 0.38
CTSB-222ENST00000531551 TBK1Q9UHD2 729 aa17.42■□□□□ 0.38
CTSB-222ENST00000531551 GNPTGQ9UJJ9 305 aa17.42■□□□□ 0.38
CTSB-222ENST00000531551 SUFUQ9UMX1 484 aa17.42■□□□□ 0.38
CTSB-222ENST00000531551 CUL9Q8IWT3 2517 aa17.42■□□□□ 0.38
CTSB-222ENST00000531551 A0A1B0GVT2 93 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 NUAK1O60285 661 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 TRIM16O95361 564 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 CFIP05156 583 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 PKMP14618 531 aaKnown RBP17.41■□□□□ 0.38
CTSB-222ENST00000531551 GNPDA1P46926 289 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 CSE1LP55060 971 aaKnown RBP17.41■□□□□ 0.38
CTSB-222ENST00000531551 OVGP1Q12889 678 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 BMPR2Q13873 1038 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 TCEA2Q15560 299 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 PLA2G4EQ3MJ16 856 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 CTSL3PQ5NE16 218 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 RBM20Q5T481 1227 aaKnown RBP17.41■□□□□ 0.38
CTSB-222ENST00000531551 KCTD16Q68DU8 428 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 GALNT7Q86SF2 657 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 HID1Q8IV36 788 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 OR1E3Q8WZA6 343 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 PDXPQ96GD0 296 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 VPS39Q96JC1 886 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 ELMO2Q96JJ3 720 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 BIRC8Q96P09 236 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 RHOJQ9H4E5 214 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 FAM8A1Q9UBU6 413 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 SLC17A4Q9Y2C5 497 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 GPSM3Q9Y4H4 160 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 PCDHB1Q9Y5F3 818 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 PCYT1BQ9Y5K3 369 aaPredicted RBP17.41■□□□□ 0.38
CTSB-222ENST00000531551 ZNF318Q5VUA4 2279 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 SPTY2D1-AS1A0A0U1RR47 76 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 PRSS38A1L453 326 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 E5RI56 91 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 VILLO15195 856 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 GRID2O43424 1007 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 ESR1P03372 595 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 FUCA1P04066 466 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 CHRM3P20309 590 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 GCAP28676 217 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 PBLDP30039 288 aaPredicted RBP17.41■□□□□ 0.38
CTSB-222ENST00000531551 SRP54P61011 504 aaKnown RBP17.41■□□□□ 0.38
CTSB-222ENST00000531551 CCDC6Q16204 474 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 PRAMEF14Q5SWL7 426 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 MROH9Q5TGP6 573 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 ZNF549Q6P9A3 640 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 HDXQ7Z353 690 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 DCP2Q8IU60 420 aaKnown RBP17.41■□□□□ 0.38
CTSB-222ENST00000531551 GALNT13Q8IUC8 556 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 KRT222Q8N1A0 295 aa17.41■□□□□ 0.38
CTSB-222ENST00000531551 DCAKDQ8WVC6 231 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms