RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 SPO11Q9Y5K1 396 aa12.41□□□□□ -0.42
C11orf54-210ENST00000531516 SHROOM3Q8TF72 1996 aa12.41□□□□□ -0.42
C11orf54-210ENST00000531516 ANKRD36A6QL64 1941 aa12.41□□□□□ -0.42
C11orf54-210ENST00000531516 IGHV5-10-1A0A0J9YXX1 117 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 CFAP99D6REC4 459 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 AURKAO14965 403 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 CHUKO15111 745 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 LIPCP11150 499 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 PYGMP11217 842 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 AMD1P17707 334 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 HADHAP40939 763 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 CHRNA4P43681 627 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 ATP1A2P50993 1020 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 RAB15P59190 212 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 VAC14Q08AM6 782 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 PLA2G4EQ3MJ16 856 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 ATP13A5Q4VNC0 1218 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 TAF1BQ53T94 588 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-210ENST00000531516 NKAIN2Q5VXU1 208 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 WDR74Q6RFH5 385 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-210ENST00000531516 FAM151BQ6UXP7 276 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 AMZ2Q86W34 360 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 GAS2L3Q86XJ1 694 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 BEND7Q8N7W2 519 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-210ENST00000531516 LSM14AQ8ND56 463 aaKnown RBP12.4□□□□□ -0.42
C11orf54-210ENST00000531516 HEXDCQ8WVB3 486 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 NCSTNQ92542 709 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 ULK4Q96C45 1275 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 TAAR9Q96RI9 348 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 CCNL2Q96S94 520 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-210ENST00000531516 TBL1YQ9BQ87 522 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 NUDT22Q9BRQ3 303 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 DESI2Q9BSY9 194 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 FRMD8P1Q9BZ68 369 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-210ENST00000531516 SEMA6CQ9H3T2 930 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 IL26Q9NPH9 171 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 IL17CQ9P0M4 197 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 ACSL6Q9UKU0 697 aa12.4□□□□□ -0.42
C11orf54-210ENST00000531516 DNMT3AQ9Y6K1 912 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-210ENST00000531516 TK2O00142 265 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 AGRPO00253 132 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 MTX2O75431 263 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 FTCDO95954 541 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 AGTP01019 485 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 HGFP14210 728 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 PSMB4P28070 264 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 CHRNA6Q15825 494 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 PARP6Q2NL67 630 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 MANEAQ5SRI9 462 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.39□□□□□ -0.43
C11orf54-210ENST00000531516 DCAF12Q5T6F0 453 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 ARHGAP40Q5TG30 622 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 CYB5D1Q6P9G0 228 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 ZNF449Q6P9G9 518 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 KLHL35Q6PF15 583 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 WASH2PQ6VEQ5 465 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 LINC00523Q86TU6 105 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 FAM129CQ86XR2 697 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 TTC30BQ8N4P2 665 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 DDHD1Q8NEL9 900 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 CCDC110Q8TBZ0 833 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 ZNF398Q8TD17 642 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 ALG3Q92685 438 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 USP7Q93009 1102 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 TEFMQ96QE5 360 aaKnown RBP12.39□□□□□ -0.43
C11orf54-210ENST00000531516 LRRC40Q9H9A6 602 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 UCK1Q9HA47 277 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 WASH6PQ9NQA3 447 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 PRDM8Q9NQV8 689 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 POT1Q9NUX5 634 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 SLC39A1Q9NY26 324 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 ST14Q9Y5Y6 855 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 SLC30A1Q9Y6M5 507 aa12.39□□□□□ -0.43
C11orf54-210ENST00000531516 PRAMEF33A0A0G2JMD5 474 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 A0A1W2PNU3 283 aaPredicted RBP12.38□□□□□ -0.43
C11orf54-210ENST00000531516 LILRA5A6NI73 299 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 E7EVH7 732 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 STMND1H3BQB6 276 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 ERVH48-1M5A8F1 160 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 ARHGAP6O43182 974 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 PRAMEF10O60809 474 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 PRAMEF1O95521 474 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 THRAP10827 490 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 XRCC1P18887 633 aaPredicted RBP12.38□□□□□ -0.43
C11orf54-210ENST00000531516 ITIH1P19827 911 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 ITGALP20701 1170 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 STIP1P31948 543 aaKnown RBP12.38□□□□□ -0.43
C11orf54-210ENST00000531516 LMAN1P49257 510 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 LAMB3Q13751 1172 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 C16orf72Q14CZ0 275 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 SEPT7Q16181 437 aaKnown RBP12.38□□□□□ -0.43
C11orf54-210ENST00000531516 SNAP47Q5SQN1 464 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 FAM182AQ5T1J6 154 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 ZNF648Q5T619 568 aaPredicted RBP12.38□□□□□ -0.43
C11orf54-210ENST00000531516 AGAP9Q5VTM2 703 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 RANBP10Q6VN20 620 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 ZNF761Q86XN6 746 aaPredicted RBP12.38□□□□□ -0.43
C11orf54-210ENST00000531516 FAM71DQ8N9W8 422 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 RCBTB1Q8NDN9 531 aa12.38□□□□□ -0.43
C11orf54-210ENST00000531516 OR4K2Q8NGD2 314 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms