RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 XKR5Q6UX68 686 aa16■□□□□ 0.15
RELA-216ENST00000531238 GSTA5Q7RTV2 222 aa16■□□□□ 0.15
RELA-216ENST00000531238 SPRED1Q7Z699 444 aa16■□□□□ 0.15
RELA-216ENST00000531238 B3GNT8Q7Z7M8 397 aa16■□□□□ 0.15
RELA-216ENST00000531238 LINC00523Q86TU6 105 aa16■□□□□ 0.15
RELA-216ENST00000531238 LRRTM4Q86VH4 590 aa16■□□□□ 0.15
RELA-216ENST00000531238 SFRP1Q8N474 314 aa16■□□□□ 0.15
RELA-216ENST00000531238 ACTRT1Q8TDG2 376 aa16■□□□□ 0.15
RELA-216ENST00000531238 SLC37A2Q8TED4 501 aa16■□□□□ 0.15
RELA-216ENST00000531238 MAGOHBQ96A72 148 aaKnown RBP16■□□□□ 0.15
RELA-216ENST00000531238 SGF29Q96ES7 293 aa16■□□□□ 0.15
RELA-216ENST00000531238 ZNF778Q96MU6 729 aa16■□□□□ 0.15
RELA-216ENST00000531238 C19orf43Q9BQ61 176 aa16■□□□□ 0.15
RELA-216ENST00000531238 HOMER3Q9NSC5 361 aa16■□□□□ 0.15
RELA-216ENST00000531238 ZMIZ1Q9ULJ6 1067 aa16■□□□□ 0.15
RELA-216ENST00000531238 NEU2Q9Y3R4 380 aa16■□□□□ 0.15
RELA-216ENST00000531238 ENTPD2Q9Y5L3 495 aa16■□□□□ 0.15
RELA-216ENST00000531238 CFAP47Q6ZTR5 3102 aa16■□□□□ 0.15
RELA-216ENST00000531238 PRAMEF33A0A0G2JMD5 474 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 PMS2P1A4D2B8 440 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 H7C0S8 307 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 POP7O75817 140 aaKnown RBP15.99■□□□□ 0.15
RELA-216ENST00000531238 APRTP07741 180 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 BRAFP15056 766 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 CD1CP29017 333 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 MC4RP32245 332 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 COILP38432 576 aaPredicted RBP15.99■□□□□ 0.15
RELA-216ENST00000531238 PDE1BQ01064 536 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 CFHR1Q03591 330 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 CDH17Q12864 832 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 SEPT6Q14141 434 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 RTP5Q14D33 572 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 ST3GAL2Q16842 350 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.99■□□□□ 0.15
RELA-216ENST00000531238 ZNF574Q6ZN55 896 aaPredicted RBP15.99■□□□□ 0.15
RELA-216ENST00000531238 RBM44Q6ZP01 1051 aaKnown RBP15.99■□□□□ 0.15
RELA-216ENST00000531238 ZNF761Q86XN6 746 aaPredicted RBP15.99■□□□□ 0.15
RELA-216ENST00000531238 CCNJLQ8IV13 435 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 PIANPQ8IYJ0 282 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 BEND7Q8N7W2 519 aaPredicted RBP15.99■□□□□ 0.15
RELA-216ENST00000531238 DNAAF3Q8N9W5 541 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 STYXQ8WUJ0 223 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 LRRC45Q96CN5 670 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 ATXN7L3BQ96GX2 97 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 DEPDC7Q96QD5 511 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 SLC2A6Q9UGQ3 507 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 DNAJC16Q9Y2G8 782 aa15.99■□□□□ 0.15
RELA-216ENST00000531238 TRBV5-4A0A0C4DH59 114 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 OR51F1A6NGY5 319 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 OR2AG2A6NM03 316 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 RHPN2P1A8MT19 583 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 E7EVH7 732 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 TCEA3O75764 348 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 ALDH4A1P30038 563 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 ACTN2P35609 894 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 HADHAP40939 763 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 LMAN1P49257 510 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 TERF1P54274 439 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 NKAIN2Q5VXU1 208 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 PPP1R21Q6ZMI0 780 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 FAM83HQ6ZRV2 1179 aaPredicted RBP15.98■□□□□ 0.15
RELA-216ENST00000531238 USP53Q70EK8 1073 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 ZNF534Q76KX8 674 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 DET1Q7L5Y6 550 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 SNX20Q7Z614 316 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 TRAPPC5Q8IUR0 188 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 OR13J1Q8NGT2 312 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 PRR11Q96HE9 360 aaPredicted RBP15.98■□□□□ 0.15
RELA-216ENST00000531238 GFM1Q96RP9 751 aaKnown RBP15.98■□□□□ 0.15
RELA-216ENST00000531238 TIMM29Q9BSF4 260 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 NRSN2Q9GZP1 204 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 CCDC86Q9H6F5 360 aaKnown RBP15.98■□□□□ 0.15
RELA-216ENST00000531238 SYNDIG1Q9H7V2 258 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 ZNF624Q9P2J8 865 aaPredicted RBP15.98■□□□□ 0.15
RELA-216ENST00000531238 WDR37Q9Y2I8 494 aa15.98■□□□□ 0.15
RELA-216ENST00000531238 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.98■□□□□ 0.153e-6■■■■□ 19.9
RELA-216ENST00000531238 KMT2BQ9UMN6 2715 aaPredicted RBP15.97■□□□□ 0.15
RELA-216ENST00000531238 CCDC162PA2VCL2 907 aa15.97■□□□□ 0.15
RELA-216ENST00000531238 PGRMC1O00264 195 aaKnown RBP15.97■□□□□ 0.15
RELA-216ENST00000531238 CES2O00748 559 aa15.97■□□□□ 0.15
RELA-216ENST00000531238 KRT14P02533 472 aa15.97■□□□□ 0.15
RELA-216ENST00000531238 F3P13726 295 aa15.97■□□□□ 0.15
RELA-216ENST00000531238 HOXB3P14651 431 aaPredicted RBP15.97■□□□□ 0.15
RELA-216ENST00000531238 RPL10P27635 214 aaKnown RBP15.97■□□□□ 0.15
RELA-216ENST00000531238 SLC19A1P41440 591 aa15.97■□□□□ 0.15
RELA-216ENST00000531238 FASLGP48023 281 aa15.97■□□□□ 0.15
RELA-216ENST00000531238 GNG11P61952 73 aa15.97■□□□□ 0.15
RELA-216ENST00000531238 ZFP36L1Q07352 338 aaKnown RBP15.97■□□□□ 0.15
RELA-216ENST00000531238 SPIDRQ14159 915 aa15.97■□□□□ 0.15
RELA-216ENST00000531238 CLCA4Q14CN2 919 aa15.97■□□□□ 0.15
RELA-216ENST00000531238 INSCQ1MX18 579 aa15.97■□□□□ 0.15
RELA-216ENST00000531238 AMZ1Q400G9 498 aa15.97■□□□□ 0.15
RELA-216ENST00000531238 PAPD7Q5XG87 772 aaKnown RBP15.97■□□□□ 0.15
RELA-216ENST00000531238 ABRAXAS1Q6UWZ7 409 aa15.97■□□□□ 0.15
RELA-216ENST00000531238 C4orf22Q6V702 233 aa15.97■□□□□ 0.15
RELA-216ENST00000531238 NXPE1Q8N323 547 aa15.97■□□□□ 0.15
RELA-216ENST00000531238 C17orf53Q8N3J3 647 aaPredicted RBP15.97■□□□□ 0.15
RELA-216ENST00000531238 WDR48Q8TAF3 677 aa15.97■□□□□ 0.15
RELA-216ENST00000531238 ZCCHC14Q8WYQ9 949 aaKnown RBP15.97■□□□□ 0.15
RELA-216ENST00000531238 TTC25Q96NG3 672 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms