RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 CLCN4P51793 760 aa4□□□□□ -1.77
CTR9-205ENST00000529898 RAD23BP54727 409 aa4□□□□□ -1.77
CTR9-205ENST00000529898 PSMD4P55036 377 aaKnown RBP4□□□□□ -1.77
CTR9-205ENST00000529898 WNT3P56703 355 aa4□□□□□ -1.77
CTR9-205ENST00000529898 EEFSECP57772 596 aaKnown RBP4□□□□□ -1.77
CTR9-205ENST00000529898 CDR2Q01850 454 aa4□□□□□ -1.77
CTR9-205ENST00000529898 GHRHRQ02643 423 aa4□□□□□ -1.77
CTR9-205ENST00000529898 PDCLQ13371 301 aa4□□□□□ -1.77
CTR9-205ENST00000529898 RCN2Q14257 317 aa4□□□□□ -1.77
CTR9-205ENST00000529898 DMC1Q14565 340 aa4□□□□□ -1.77
CTR9-205ENST00000529898 LPIN1Q14693 890 aa4□□□□□ -1.77
CTR9-205ENST00000529898 KCNJ8Q15842 424 aa4□□□□□ -1.77
CTR9-205ENST00000529898 SRSF7Q16629 238 aaKnown RBP eCLIP4□□□□□ -1.77
CTR9-205ENST00000529898 MAPKAPK3Q16644 382 aa4□□□□□ -1.77
CTR9-205ENST00000529898 UGP2Q16851 508 aa4□□□□□ -1.77
CTR9-205ENST00000529898 ZNF829Q3KNS6 432 aaPredicted RBP4□□□□□ -1.77
CTR9-205ENST00000529898 GALNTL6Q49A17 601 aa4□□□□□ -1.77
CTR9-205ENST00000529898 AARDQ4LEZ3 155 aa4□□□□□ -1.77
CTR9-205ENST00000529898 TREML2Q5T2D2 321 aa4□□□□□ -1.77
CTR9-205ENST00000529898 TTC22Q5TAA0 569 aa4□□□□□ -1.77
CTR9-205ENST00000529898 C6orf163Q5TEZ5 329 aa4□□□□□ -1.77
CTR9-205ENST00000529898 AGBL2Q5U5Z8 902 aa4□□□□□ -1.77
CTR9-205ENST00000529898 PRMT9Q6P2P2 845 aa4□□□□□ -1.77
CTR9-205ENST00000529898 ZYG11AQ6WRX3 759 aa4□□□□□ -1.77
CTR9-205ENST00000529898 CATSPERGQ6ZRH7 1159 aa4□□□□□ -1.77
CTR9-205ENST00000529898 DCDC5Q6ZRR9 648 aa4□□□□□ -1.77
CTR9-205ENST00000529898 LINC00299Q6ZSB3 139 aa4□□□□□ -1.77
CTR9-205ENST00000529898 ASRGL1Q7L266 308 aa4□□□□□ -1.77
CTR9-205ENST00000529898 PARS2Q7L3T8 475 aaKnown RBP4□□□□□ -1.77
CTR9-205ENST00000529898 NIPA1Q7RTP0 329 aa4□□□□□ -1.77
CTR9-205ENST00000529898 SLC29A4Q7RTT9 530 aa4□□□□□ -1.77
CTR9-205ENST00000529898 PIGWQ7Z7B1 504 aa4□□□□□ -1.77
CTR9-205ENST00000529898 CPLX4Q7Z7G2 160 aa4□□□□□ -1.77
CTR9-205ENST00000529898 SLFN11Q7Z7L1 901 aa4□□□□□ -1.77
CTR9-205ENST00000529898 NEK8Q86SG6 692 aa4□□□□□ -1.77
CTR9-205ENST00000529898 ASPGQ86U10 573 aa4□□□□□ -1.77
CTR9-205ENST00000529898 RHPN2Q8IUC4 686 aa4□□□□□ -1.77
CTR9-205ENST00000529898 NELFCDQ8IXH7 590 aa4□□□□□ -1.77
CTR9-205ENST00000529898 ADGRF2Q8IZF7 708 aa4□□□□□ -1.77
CTR9-205ENST00000529898 TSPYL6Q8N831 410 aa4□□□□□ -1.77
CTR9-205ENST00000529898 NAT8LQ8N9F0 302 aa4□□□□□ -1.77
CTR9-205ENST00000529898 C7orf57Q8NEG2 295 aa4□□□□□ -1.77
CTR9-205ENST00000529898 LPCAT1Q8NF37 534 aa4□□□□□ -1.77
CTR9-205ENST00000529898 RFWD2Q8NHY2 731 aa4□□□□□ -1.77
CTR9-205ENST00000529898 ADAMTS16Q8TE57 1224 aa4□□□□□ -1.77
CTR9-205ENST00000529898 DENND1AQ8TEH3 1009 aa4□□□□□ -1.77
CTR9-205ENST00000529898 GIPC3Q8TF64 312 aa4□□□□□ -1.77
CTR9-205ENST00000529898 SETD7Q8WTS6 366 aaKnown RBP4□□□□□ -1.77
CTR9-205ENST00000529898 ATG4AQ8WYN0 398 aa4□□□□□ -1.77
CTR9-205ENST00000529898 VPS33AQ96AX1 596 aa4□□□□□ -1.77
CTR9-205ENST00000529898 RAD51AP1Q96B01 352 aa4□□□□□ -1.77
CTR9-205ENST00000529898 KLHL29Q96CT2 875 aa4□□□□□ -1.77
CTR9-205ENST00000529898 CHMP6Q96FZ7 201 aa4□□□□□ -1.77
CTR9-205ENST00000529898 TMEM68Q96MH6 324 aa4□□□□□ -1.77
CTR9-205ENST00000529898 ZNF578Q96N58 590 aaPredicted RBP4□□□□□ -1.77
CTR9-205ENST00000529898 RUNDC3BQ96NL0 473 aa4□□□□□ -1.77
CTR9-205ENST00000529898 RMDN3Q96TC7 470 aa4□□□□□ -1.77
CTR9-205ENST00000529898 CGRRF1Q99675 332 aa4□□□□□ -1.77
CTR9-205ENST00000529898 MESP1Q9BRJ9 268 aa4□□□□□ -1.77
CTR9-205ENST00000529898 ACAT2Q9BWD1 397 aa4□□□□□ -1.77
CTR9-205ENST00000529898 TDRD1Q9BXT4 1180 aaKnown RBP4□□□□□ -1.77
CTR9-205ENST00000529898 STK33Q9BYT3 514 aa4□□□□□ -1.77
CTR9-205ENST00000529898 DPH1Q9BZG8 443 aa4□□□□□ -1.77
CTR9-205ENST00000529898 TTYH3Q9C0H2 523 aa4□□□□□ -1.77
CTR9-205ENST00000529898 POLR1EQ9GZS1 481 aaKnown RBP4□□□□□ -1.77
CTR9-205ENST00000529898 ANKRD2Q9GZV1 360 aa4□□□□□ -1.77
CTR9-205ENST00000529898 THAP9Q9H5L6 903 aa4□□□□□ -1.77
CTR9-205ENST00000529898 STN1Q9H668 368 aaKnown RBP4□□□□□ -1.77
CTR9-205ENST00000529898 RAVER2Q9HCJ3 691 aaKnown RBP4□□□□□ -1.77
CTR9-205ENST00000529898 SARS2Q9NP81 518 aaKnown RBP4□□□□□ -1.77
CTR9-205ENST00000529898 NLRC4Q9NPP4 1024 aa4□□□□□ -1.77
CTR9-205ENST00000529898 DDX4Q9NQI0 724 aaKnown RBP4□□□□□ -1.77
CTR9-205ENST00000529898 TXLNGQ9NUQ3 528 aa4□□□□□ -1.77
CTR9-205ENST00000529898 INTS10Q9NVR2 710 aaKnown RBP4□□□□□ -1.77
CTR9-205ENST00000529898 STK32BQ9NY57 414 aa4□□□□□ -1.77
CTR9-205ENST00000529898 NKIRAS2Q9NYR9 191 aa4□□□□□ -1.77
CTR9-205ENST00000529898 NYAP2Q9P242 653 aa4□□□□□ -1.77
CTR9-205ENST00000529898 XPR1Q9UBH6 696 aa4□□□□□ -1.77
CTR9-205ENST00000529898 RSL24D1Q9UHA3 163 aaKnown RBP4□□□□□ -1.77
CTR9-205ENST00000529898 TAGLN3Q9UI15 199 aa4□□□□□ -1.77
CTR9-205ENST00000529898 VPS51Q9UID3 782 aa4□□□□□ -1.77
CTR9-205ENST00000529898 MOSPD1Q9UJG1 213 aa4□□□□□ -1.77
CTR9-205ENST00000529898 SERTAD3Q9UJW9 196 aa4□□□□□ -1.77
CTR9-205ENST00000529898 GMEB2Q9UKD1 530 aa4□□□□□ -1.77
CTR9-205ENST00000529898 NDRG4Q9ULP0 352 aaKnown RBP4□□□□□ -1.77
CTR9-205ENST00000529898 PCDHA6Q9UN73 950 aa4□□□□□ -1.77
CTR9-205ENST00000529898 ARHGAP26Q9UNA1 814 aa4□□□□□ -1.77
CTR9-205ENST00000529898 MTMR6Q9Y217 621 aa4□□□□□ -1.77
CTR9-205ENST00000529898 ERGIC3Q9Y282 383 aa4□□□□□ -1.77
CTR9-205ENST00000529898 DERAQ9Y315 318 aa4□□□□□ -1.77
CTR9-205ENST00000529898 MAD1L1Q9Y6D9 718 aa4□□□□□ -1.77
CTR9-205ENST00000529898 SIPA1L2Q9P2F8 1722 aaPredicted RBP4□□□□□ -1.77
CTR9-205ENST00000529898 RTL9Q8NET4 1388 aa4□□□□□ -1.77
CTR9-205ENST00000529898 CEMIPQ8WUJ3 1361 aa4□□□□□ -1.77
CTR9-205ENST00000529898 RGPD2P0DJD1 1756 aa3.99□□□□□ -1.77
CTR9-205ENST00000529898 WDR17Q8IZU2 1322 aa3.99□□□□□ -1.77
CTR9-205ENST00000529898 DDX60Q8IY21 1712 aaKnown RBP3.99□□□□□ -1.77
CTR9-205ENST00000529898 MED1Q15648 1581 aaPredicted RBP3.99□□□□□ -1.77
CTR9-205ENST00000529898 OVOS2A0A0G2JMS6 1433 aa3.99□□□□□ -1.77
CTR9-205ENST00000529898 OVOS2A0A0J9YW53 1432 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms