RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SLC30A1Q9Y6M5 507 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 RNF215Q9Y6U7 377 aa12.5□□□□□ -0.41
CCDC90B-216ENST00000529856 TRBV5-4A0A0C4DH59 114 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 TCRBV7S3A2A0A539 114 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 CCDC78A2IDD5 438 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 A6NCN8 305 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 NUDT21O43809 227 aaKnown RBP12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 EML2O95834 649 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 MSH3P20585 1137 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 NPY2RP49146 381 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 ARSDP51689 593 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 MAZP56270 477 aaKnown RBP12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 TARDBPQ13148 414 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 CAMK2BQ13554 666 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 ZRANB3Q5FWF4 1079 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 LRRC8BQ6P9F7 803 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 IYDQ6PHW0 289 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 TMEM220Q6QAJ8 160 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 NLRP9Q7RTR0 991 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 C11orf96Q7Z7L8 435 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 TRAPPC5Q8IUR0 188 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 NXPE1Q8N323 547 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 DCBLD1Q8N8Z6 715 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 OR13J1Q8NGT2 312 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 WDR48Q8TAF3 677 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 PATE1Q8WXA2 126 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 GATA6Q92908 595 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 ULK4Q96C45 1275 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 TMEM121BQ9BXQ6 578 aaPredicted RBP12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 RNF14Q9UBS8 474 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 CLCA2Q9UQC9 943 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 TCAF1Q9Y4C2 921 aa12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 DNMT3AQ9Y6K1 912 aaPredicted RBP12.49□□□□□ -0.41
CCDC90B-216ENST00000529856 TRBV23OR9-2A0A075B6M9 112 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 PRR19A6NJB7 356 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 RHPN2P1A8MT19 583 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 NTN3O00634 580 aaPredicted RBP12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 CASC3O15234 703 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 SNX2O60749 519 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 KCNJ13O60928 360 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 POP7O75817 140 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 F3P13726 295 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 AKT1P31749 480 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 PAFAH1B1P43034 410 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 CDKN1CP49918 316 aaPredicted RBP12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 CTSCP53634 463 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 SESN2P58004 480 aaPredicted RBP12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 ETF1P62495 437 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 CCL7P80098 99 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 SARNPP82979 210 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 B4GALNT1Q00973 533 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 ACVR1Q04771 509 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 CACNG1Q06432 222 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 INSCQ1MX18 579 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 PLA2G4EQ3MJ16 856 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 PCID2Q5JVF3 399 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 ANKRD22Q5VYY1 191 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 MICALCLQ6ZW33 695 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 ZNF534Q76KX8 674 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 ZNF438Q7Z4V0 828 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 SFRP1Q8N474 314 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 Q8N9G6 341 aaPredicted RBP12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 MCUQ8NE86 351 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 PPHLN1Q8NEY8 458 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 HEXDCQ8WVB3 486 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 CPT1BQ92523 772 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 SLCO2A1Q92959 643 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 PEX13Q92968 403 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 HDAC10Q969S8 669 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 SGF29Q96ES7 293 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 ZNF514Q96K75 400 aaPredicted RBP12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 ZNF778Q96MU6 729 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 COPS8Q99627 209 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 IL22Q9GZX6 179 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 DDX47Q9H0S4 455 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 PRDM8Q9NQV8 689 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 CHRAC1Q9NRG0 131 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 ZDHHC3Q9NYG2 299 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 BFARQ9NZS9 450 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 SLC2A6Q9UGQ3 507 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 PCYOX1Q9UHG3 505 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 DNAJC16Q9Y2G8 782 aa12.48□□□□□ -0.41
CCDC90B-216ENST00000529856 AKAP13Q12802 2813 aa12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 IGLV3-16A0A075B6K0 115 aa12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 CCDC162PA2VCL2 907 aa12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 OR2AG2A6NM03 316 aa12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 OR5K4A6NMS3 321 aa12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 PPM1DO15297 605 aa12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 B4GAT1O43505 415 aa12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 SGTAO43765 313 aa12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 TCEA3O75764 348 aa12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 PRSS56P0CW18 603 aa12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 RALBP11234 206 aa12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 ATP1B2P14415 290 aaPredicted RBP12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 SLC2A4P14672 509 aa12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 VCLP18206 1134 aa12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 ACRV1P26436 265 aa12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 PTGIRP43119 386 aa12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 GPR3P46089 330 aa12.47□□□□□ -0.41
CCDC90B-216ENST00000529856 FASLGP48023 281 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms