RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 TIMM29Q9BSF4 260 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 LRRN3Q9H3W5 708 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 NLE1Q9NVX2 485 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-215ENST00000528396 TBC1D29Q9UFV1 150 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 TTC7AQ9ULT0 858 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-215ENST00000528396 PYCARDQ9ULZ3 195 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 ST14Q9Y5Y6 855 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 SCN8AQ9UQD0 1980 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 CFAP47Q6ZTR5 3102 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 ARHGEF17Q96PE2 2063 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-215ENST00000528396 KIR2DS5A0A0G2JLQ3 304 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 A0A0G2JNG1 304 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 OR2AG2A6NM03 316 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 OR5K4A6NMS3 321 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 TMX2-CTNND1H3BSU7 103 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 KIR2DS3K7RE56 304 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 CCL22O00626 93 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 CES2O00748 559 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 CHUKO15111 745 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 KRT14P02533 472 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 F3P13726 295 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 SESN2P58004 480 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-215ENST00000528396 SARNPP82979 210 aaKnown RBP13.19□□□□□ -0.3
CAPN1-215ENST00000528396 GPS1Q13098 491 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 KIR2DS5Q14953 304 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 SEPT7Q16181 437 aaKnown RBP13.19□□□□□ -0.3
CAPN1-215ENST00000528396 GPR33Q49SQ1 333 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 KHDC1Q4VXA5 237 aaKnown RBP13.19□□□□□ -0.3
CAPN1-215ENST00000528396 FNBP1LQ5T0N5 605 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 CCDC137Q6PK04 289 aaKnown RBP13.19□□□□□ -0.3
CAPN1-215ENST00000528396 TMEM220Q6QAJ8 160 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 DET1Q7L5Y6 550 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 NLRP9Q7RTR0 991 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 SPRED1Q7Z699 444 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 SLC9B2Q86UD5 537 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 AMZ2Q86W34 360 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 NAGSQ8N159 534 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 RASGEF1AQ8N9B8 481 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 ACTRT1Q8TDG2 376 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 SLC37A2Q8TED4 501 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 GRK7Q8WTQ7 553 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 COG1Q8WTW3 980 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 STYXQ8WUJ0 223 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 SH3KBP1Q96B97 665 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 GRAMD1AQ96CP6 724 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 AHCYL2Q96HN2 611 aaKnown RBP13.19□□□□□ -0.3
CAPN1-215ENST00000528396 COPS8Q99627 209 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 NAPGQ99747 312 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-215ENST00000528396 STRADBQ9C0K7 418 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 FAM96AQ9H5X1 160 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 EIF2B3Q9NR50 452 aaKnown RBP13.19□□□□□ -0.3
CAPN1-215ENST00000528396 KCNK4Q9NYG8 393 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 RABGEF1Q9UJ41 708 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 TMPRSS11EQ9UL52 423 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 PCYT1BQ9Y5K3 369 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-215ENST00000528396 RP1P56715 2156 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 FRYQ5TBA9 3013 aa13.19□□□□□ -0.3
CAPN1-215ENST00000528396 USP24Q9UPU5 2620 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 CTAGE9A4FU28 777 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 D6RAR5 112 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 GAPDHSO14556 408 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-215ENST00000528396 KCNJ13O60928 360 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 PHF2O75151 1096 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 POP7O75817 140 aaKnown RBP13.18□□□□□ -0.3
CAPN1-215ENST00000528396 ADRA1DP25100 572 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 PBLDP30039 288 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-215ENST00000528396 COILP38432 576 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-215ENST00000528396 HALP42357 657 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 GPR3P46089 330 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 CLCNKAP51800 687 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 OR1D5P58170 312 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 XIAPP98170 497 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 CDK16Q00536 496 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 HHEXQ03014 270 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 CACNG1Q06432 222 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 CYP4F3Q08477 520 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 ISXQ2M1V0 245 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 FOXR1Q6PIV2 292 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 NXPE1Q8N323 547 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 SFRP1Q8N474 314 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 MDM1Q8TC05 714 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 CAPZA3Q96KX2 299 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 TMEM74Q96NL1 305 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 TTC1Q99614 292 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 NRSN2Q9GZP1 204 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 VPS37BQ9H9H4 285 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 EPB41L5Q9HCM4 733 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 CASS4Q9NQ75 786 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 PRDM8Q9NQV8 689 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 SMARCAL1Q9NZC9 954 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 BFARQ9NZS9 450 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 FAM8A1Q9UBU6 413 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 PCDHB1Q9Y5F3 818 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 ACACAQ13085 2346 aa13.18□□□□□ -0.3
CAPN1-215ENST00000528396 APC2O95996 2303 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 ZNF185O15231 689 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 EML2O95834 649 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 VIPP01282 170 aa13.17□□□□□ -0.3
CAPN1-215ENST00000528396 RPL10P27635 214 aaKnown RBP13.17□□□□□ -0.3
CAPN1-215ENST00000528396 GRIA1P42261 906 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms