RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 CCNG2Q16589 344 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 INSCQ1MX18 579 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 KHDC1Q4VXA5 237 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 DRICH1Q6PGQ1 229 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 ABRAXAS1Q6UWZ7 409 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 WASH2PQ6VEQ5 465 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 RAB11FIP2Q7L804 512 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 LINC00523Q86TU6 105 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 SLITRK4Q8IW52 837 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 FBXO39Q8N4B4 442 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 ZNF248Q8NDW4 579 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 OR4K2Q8NGD2 314 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 GDAP1Q8TB36 358 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 MAIP1Q8WWC4 291 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 ZNF514Q96K75 400 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 UGT1A7Q9HAW7 530 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 UGT1A10Q9HAW8 530 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 UGT1A8Q9HAW9 530 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 EPB41L5Q9HCM4 733 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 WASH6PQ9NQA3 447 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 KCNK4Q9NYG8 393 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 SLC23A2Q9UGH3 650 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 DRG1Q9Y295 367 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 ZKSCAN5Q9Y2L8 839 aa11.94□□□□□ -0.5
TRAPPC4-209ENST00000528230 TRBV23OR9-2A0A075B6M9 112 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 IGHV1OR21-1A0A087WYE8 117 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 KLHL33A6NCF5 533 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 LDB2O43679 373 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 SNX2O60749 519 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 SRP72O76094 671 aaKnown RBP11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 PRAMEF1O95521 474 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 AP2A1O95782 977 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 ITGA2BP08514 1039 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 XRCC1P18887 633 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 FDFT1P37268 417 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 EPHA4P54764 986 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 PCBP4P57723 403 aaKnown RBP11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 XIAPP98170 497 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 HHEXQ03014 270 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 DMPKQ09013 629 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 TRA2AQ13595 282 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 PTPRCAPQ14761 206 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 AMZ1Q400G9 498 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 MAP9Q49MG5 647 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 GPRC6AQ5T6X5 926 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 AGAP9Q5VTM2 703 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 CRTC3Q6UUV7 619 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 USP53Q70EK8 1073 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 C11orf96Q7Z7L8 435 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 CLEC14AQ86T13 490 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 RASGEF1AQ8N9B8 481 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 OR4D9Q8NGE8 314 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 C1orf54Q8WWF1 131 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 ATG4AQ8WYN0 398 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 CCDC97Q96F63 343 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 SLC38A3Q99624 504 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 CMKLR1Q99788 373 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 TLR10Q9BXR5 811 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 FOXP3Q9BZS1 431 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 B3GNT4Q9C0J1 378 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 EPB41L1Q9H4G0 881 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 ASB8Q9H765 288 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 UCK1Q9HA47 277 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 PRDM8Q9NQV8 689 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 AKAP7Q9P0M2 348 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 CPNE7Q9UBL6 633 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 ZNF148Q9UQR1 794 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 KCTD3Q9Y597 815 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 PCDHGA7Q9Y5G6 932 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 DMXL2Q8TDJ6 3036 aa11.93□□□□□ -0.5
TRAPPC4-209ENST00000528230 GOLGA6L3A6NEY3 463 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 H7C0S8 307 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 HGSO14964 777 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 TNFSF15O95150 251 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 MSH3P20585 1137 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 IDSP22304 550 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 PSMA3P25788 255 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 CA5AP35218 305 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 ZNF140P52738 457 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 LIMK2P53671 638 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 NFATC2Q13469 925 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 SIX1Q15475 284 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 LONRF2Q1L5Z9 754 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 GPR33Q49SQ1 333 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 TMEM71Q6P5X7 295 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 TMEM220Q6QAJ8 160 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 C4orf22Q6V702 233 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 ZNF574Q6ZN55 896 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 TMPRSS9Q7Z410 1059 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 AMZ2Q86W34 360 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 TRAPPC5Q8IUR0 188 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 OR10G6Q8NH81 332 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 STYXQ8WUJ0 223 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 HEXDCQ8WVB3 486 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 HNRNPLLQ8WVV9 542 aaKnown RBP11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 ULK4Q96C45 1275 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 DCBLD2Q96PD2 775 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 DPH1Q9BZG8 443 aa11.92□□□□□ -0.5
TRAPPC4-209ENST00000528230 SEMA6CQ9H3T2 930 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms