RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 PSMA8Q8TAA3 256 aa14.54□□□□□ -0.08
CAPN1-214ENST00000528165 SH3RF2Q8TEC5 729 aa14.54□□□□□ -0.08
CAPN1-214ENST00000528165 PHF10Q8WUB8 498 aaKnown RBP14.54□□□□□ -0.08
CAPN1-214ENST00000528165 FAR1Q8WVX9 515 aa14.54□□□□□ -0.08
CAPN1-214ENST00000528165 RBM4BQ9BQ04 359 aaKnown RBP14.54□□□□□ -0.08
CAPN1-214ENST00000528165 RBM4Q9BWF3 364 aaKnown RBP14.54□□□□□ -0.08
CAPN1-214ENST00000528165 UGT2B28Q9BY64 529 aa14.54□□□□□ -0.08
CAPN1-214ENST00000528165 SIK2Q9H0K1 926 aa14.54□□□□□ -0.08
CAPN1-214ENST00000528165 NXF3Q9H4D5 531 aaKnown RBP14.54□□□□□ -0.08
CAPN1-214ENST00000528165 GOLGA2P5Q9HBQ8 144 aa14.54□□□□□ -0.08
CAPN1-214ENST00000528165 SEMA4BQ9NPR2 832 aaPredicted RBP14.54□□□□□ -0.08
CAPN1-214ENST00000528165 PAK1IP1Q9NWT1 392 aaPredicted RBP14.54□□□□□ -0.08
CAPN1-214ENST00000528165 SNX2O60749 519 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 KATNA1O75449 491 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 CNTN5O94779 1100 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 S1PR4O95977 384 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 CST1P01037 141 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 NPPAP01160 153 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 GRK3P35626 688 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 SERPINH1P50454 418 aaKnown RBP14.53□□□□□ -0.08
CAPN1-214ENST00000528165 OR4D1Q15615 310 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 CLPPQ16740 277 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-214ENST00000528165 LAIR2Q6ISS4 152 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 BEND5Q7L4P6 421 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 GALNT7Q86SF2 657 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 PJA1Q8NG27 643 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 CAPSLQ8WWF8 208 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 ASPSCR1Q9BZE9 553 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 CNGB3Q9NQW8 809 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 KLK14Q9P0G3 267 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 DNAJB9Q9UBS3 223 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 BPTFQ12830 3046 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 A0A1B0GTL3 188 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 LOC100130705A0A1B0GUX0 176 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 CCL22O00626 93 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 WARSP23381 471 aaKnown RBP14.53□□□□□ -0.08
CAPN1-214ENST00000528165 HOXA11P31270 313 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-214ENST00000528165 MTPNP58546 118 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 YWHAHQ04917 246 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-214ENST00000528165 CDC20Q12834 499 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 ACOX1Q15067 660 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 CARTPTQ16568 116 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 P2RY8Q86VZ1 359 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 ARHGAP12Q8IWW6 846 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 HS3ST5Q8IZT8 346 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 ATP6V0D2Q8N8Y2 350 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 HTRA1Q92743 480 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 TXNDC15Q96J42 360 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 PPM1MQ96MI6 270 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 NOL6Q9H6R4 1146 aaKnown RBP14.53□□□□□ -0.08
CAPN1-214ENST00000528165 SP140LQ9H930 580 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 PDGFCQ9NRA1 345 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 C3orf18Q9UK00 162 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 PMF1-BGLAPU3KQ54 211 aa14.53□□□□□ -0.08
CAPN1-214ENST00000528165 FAM92AA1XBS5 289 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 FAM234BA2RU67 622 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 SLC7A4O43246 635 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 HS6ST1O60243 411 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 NUAK1O60285 661 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 CHEK2O96017 543 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 GSNP06396 782 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 MTHFD2P13995 350 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 GRIK1P39086 918 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 BAG6P46379 1132 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 MRPL19P49406 292 aaKnown RBP14.52□□□□□ -0.08
CAPN1-214ENST00000528165 ISL1P61371 349 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 PPP2R2BQ00005 443 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 SLC13A2Q13183 592 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 TTLL4Q14679 1199 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 HABP4Q5JVS0 413 aaKnown RBP14.52□□□□□ -0.08
CAPN1-214ENST00000528165 SPESP1Q6UW49 350 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 ALKAL1Q6UXT8 129 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 GPRIN1Q7Z2K8 1008 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 SVOPLQ8N434 492 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 BRINP2Q9C0B6 783 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 R3HDMLQ9H3Y0 253 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 PARVBQ9HBI1 364 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 MOV10Q9HCE1 1003 aaKnown RBP14.52□□□□□ -0.08
CAPN1-214ENST00000528165 EXD2Q9NVH0 621 aa14.52□□□□□ -0.08
CAPN1-214ENST00000528165 SMIM28A0A1B0GU29 152 aa14.52□□□□□ -0.09
CAPN1-214ENST00000528165 SUPT3HB4E1H0 165 aa14.52□□□□□ -0.09
CAPN1-214ENST00000528165 ASNA1O43681 348 aa14.52□□□□□ -0.09
CAPN1-214ENST00000528165 CCDC159P0C7I6 412 aa14.52□□□□□ -0.09
CAPN1-214ENST00000528165 PRR35P0CG20 571 aa14.52□□□□□ -0.09
CAPN1-214ENST00000528165 CD40LGP29965 261 aa14.52□□□□□ -0.09
CAPN1-214ENST00000528165 PPP5CP53041 499 aa14.52□□□□□ -0.09
CAPN1-214ENST00000528165 PAGE2Q7Z2X7 111 aa14.52□□□□□ -0.09
CAPN1-214ENST00000528165 FBXO30Q8TB52 745 aa14.52□□□□□ -0.09
CAPN1-214ENST00000528165 DYNC2LI1Q8TCX1 351 aa14.52□□□□□ -0.09
CAPN1-214ENST00000528165 MCOLN3Q8TDD5 553 aa14.52□□□□□ -0.09
CAPN1-214ENST00000528165 FIG4Q92562 907 aa14.52□□□□□ -0.09
CAPN1-214ENST00000528165 ISG20Q96AZ6 181 aaKnown RBP14.52□□□□□ -0.09
CAPN1-214ENST00000528165 SLC39A8Q9C0K1 460 aa14.52□□□□□ -0.09
CAPN1-214ENST00000528165 ABCB10Q9NRK6 738 aa14.52□□□□□ -0.09
CAPN1-214ENST00000528165 USE1Q9NZ43 259 aa14.52□□□□□ -0.09
CAPN1-214ENST00000528165 ZIM2Q9NZV7 527 aa14.52□□□□□ -0.09
CAPN1-214ENST00000528165 MARCH4Q9P2E8 410 aaPredicted RBP14.52□□□□□ -0.09
CAPN1-214ENST00000528165 SNPHO15079 494 aa14.51□□□□□ -0.09
CAPN1-214ENST00000528165 XPNPEP2O43895 674 aa14.51□□□□□ -0.09
CAPN1-214ENST00000528165 GGT1P19440 569 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms