RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 DNAJC21Q5F1R6 531 aaKnown RBP11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 PCID2Q5JVF3 399 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 ESRP1Q6NXG1 681 aaKnown RBP11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 KYAT3Q6YP21 454 aaKnown RBP11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 TRIM74Q86UV6 250 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 CCDC25Q86WR0 208 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 HEATR4Q86WZ0 1026 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 ANKMY2Q8IV38 441 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 IGDCC3Q8IVU1 814 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 GSPT2Q8IYD1 628 aaKnown RBP11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 PDIK1LQ8N165 341 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 MFSD2AQ8NA29 543 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 OR13J1Q8NGT2 312 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 STYXQ8WUJ0 223 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 IFT81Q8WYA0 676 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 ZNF669Q96BR6 464 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 STAMBPL1Q96FJ0 436 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 CFAP36Q96G28 342 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 SIGLEC10Q96LC7 697 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 PLEKHG4BQ96PX9 1271 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 ELF4Q99607 663 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 LGR4Q9BXB1 951 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 FAM83DQ9H4H8 585 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 SUDS3Q9H7L9 328 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 IL26Q9NPH9 171 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 FAM114A2Q9NRY5 505 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 RAD18Q9NS91 495 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 ZDHHC18Q9NUE0 388 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 SAMD15Q9P1V8 674 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 NFKBIL1Q9UBC1 381 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 FTSJ1Q9UET6 329 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 CHMP2BQ9UQN3 213 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 PCYT1BQ9Y5K3 369 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 ARHGEF17Q96PE2 2063 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 CREBBPQ92793 2442 aa11.45□□□□□ -0.58
CCDC90B-210ENST00000528149 TLN1Q9Y490 2541 aaKnown RBP11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 BSNQ9UPA5 3926 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 GLYATL1P3A0A0U1RQE8 302 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 CCDC162PA2VCL2 907 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 RGSL1A5PLK6 1076 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 SDR42E2A6NKP2 422 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 TRIM38O00635 465 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 FFAR2O15552 330 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 PRAMEF1O95521 474 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 PRSS56P0CW18 603 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 TSHRP16473 764 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 EPHA8P29322 1005 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 MC4RP32245 332 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 CA5AP35218 305 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 HADHAP40939 763 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 ELK3P41970 407 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 CARSP49589 748 aaKnown RBP11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 TMPRSS3P57727 454 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 PFN3P60673 137 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 XIAPP98170 497 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 CAV1Q03135 178 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 DPTQ07507 201 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 PDIA2Q13087 525 aaKnown RBP11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 DNAJC3Q13217 504 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 C1orf61Q13536 156 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 PEX6Q13608 980 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 PDE1CQ14123 709 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 TBC1D25Q3MII6 688 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 HES3Q5TGS1 186 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 PNCKQ6P2M8 343 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 EID2Q8N6I1 236 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 SAP25Q8TEE9 199 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 MFSD3Q96ES6 412 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 MED8Q96G25 268 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 KLHDC7BQ96G42 594 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 PDXPQ96GD0 296 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 NAF1Q96HR8 494 aaKnown RBP11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 TBATAQ96M53 351 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 ZSCAN5AQ9BUG6 496 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 KIFC1Q9BW19 673 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 FRMD8Q9BZ67 464 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 FAM96AQ9H5X1 160 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 WDR26Q9H7D7 661 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 MRM3Q9HC36 420 aaKnown RBP11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 ARFGAP3Q9NP61 516 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 SAYSD1Q9NPB0 183 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 MRPL40Q9NQ50 206 aaKnown RBP11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 GDF3Q9NR23 364 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 TREX1Q9NSU2 369 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 KCTD5Q9NXV2 234 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 IL1RAPL1Q9NZN1 696 aa11.44□□□□□ -0.58
CCDC90B-210ENST00000528149 USP9YO00507 2555 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 DOPEY1Q5JWR5 2465 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 E7ESA3 106 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 UGT1A9O60656 530 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 SRP72O76094 671 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 UGT1A6P19224 532 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 UGT1A1P22309 533 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 UGT1A4P22310 534 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 ARNTP27540 789 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 ECHS1P30084 290 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 UGT1A3P35503 534 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 UGT1A5P35504 534 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 RABIFP47224 123 aa11.43□□□□□ -0.58
CCDC90B-210ENST00000528149 CCT8P50990 548 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms