RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 OGFRQ9NZT2 677 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 ZNF624Q9P2J8 865 aaPredicted RBP10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 TRHDEQ9UKU6 1024 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 EFR3BQ9Y2G0 817 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 DNAJC16Q9Y2G8 782 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 KCTD3Q9Y597 815 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 SDK2Q58EX2 2172 aa10.29□□□□□ -0.76
PRPF40B-204ENST00000527253 PIEZO2Q9H5I5 2752 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 KIR2DS5A0A0G2JLQ3 304 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 A0A0G2JNG1 304 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 CCDC66A2RUB6 948 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 A8MU76 341 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 GPR89AB7ZAQ6 455 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 KIR2DS3K7RE56 304 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 DDX3YO15523 660 aaKnown RBP10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 ZW10O43264 779 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 VEGFDO43915 354 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 CDK14O94921 469 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 GPR89BP0CG08 455 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 XRCC1P18887 633 aaPredicted RBP10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 HLA-DPA1P20036 260 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 PSMB4P28070 264 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 SPAM1P38567 509 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 SLC19A1P41440 591 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 RWDD2BP57060 319 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 EIF3EP60228 445 aaKnown RBP10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 GPLD1P80108 840 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 TMEM115Q12893 351 aaPredicted RBP10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 TRA2AQ13595 282 aaKnown RBP eCLIP10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 KIR2DS5Q14953 304 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 ANKRD20A2Q5SQ80 823 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 ANKRD20A1Q5TYW2 823 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 ANKRD20A3Q5VUR7 823 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 DENND5AQ6IQ26 1287 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 FAM151BQ6UXP7 276 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 CCDC81Q6ZN84 652 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 GLT6D1Q7Z4J2 308 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 ARHGAP22Q7Z5H3 698 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 SLC9B2Q86UD5 537 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 VASH2Q86V25 355 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 LRRTM4Q86VH4 590 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 PHYKPLQ8IUZ5 450 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 BMPERQ8N8U9 685 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 RASGEF1AQ8N9B8 481 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 OR10G6Q8NH81 332 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 CCDC110Q8TBZ0 833 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 DTX3LQ8TDB6 740 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 NAT14Q8WUY8 206 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 NCSTNQ92542 709 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 CCNL2Q96S94 520 aaPredicted RBP10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 TIMM29Q9BSF4 260 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 DESI2Q9BSY9 194 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 SEMA4CQ9C0C4 833 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 OSGEPL1Q9H4B0 414 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 TRABDQ9H4I3 376 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 HACD3Q9P035 362 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 CPNE7Q9UBL6 633 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 PACSIN2Q9UNF0 486 aaPredicted RBP10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 WDR37Q9Y2I8 494 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 ARL5AQ9Y689 179 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 SLC30A1Q9Y6M5 507 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 HELZ2Q9BYK8 2649 aaKnown RBP10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 ZNF462Q96JM2 2506 aa10.28□□□□□ -0.76
PRPF40B-204ENST00000527253 GLYATL1P3A0A0U1RQE8 302 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 TCRBV7S2A1N4TA0A589 114 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 ERVH48-1M5A8F1 160 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 TK2O00142 265 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 KMOO15229 486 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 KCNN4O15554 427 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 DUX1O43812 170 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 RBP3P10745 1247 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 LIPCP11150 499 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 RPL10P27635 214 aaKnown RBP10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 MAPK9P45984 424 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 CTSCP53634 463 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 DRG2P55039 364 aaKnown RBP10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 GEMP55040 296 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 RHDQ02161 417 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 SPARCL1Q14515 664 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 SEPT7Q16181 437 aaKnown RBP10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 INSCQ1MX18 579 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 SNAP47Q5SQN1 464 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 CCDC181Q5TID7 509 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 DARS2Q6PI48 645 aaKnown RBP10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 WDR74Q6RFH5 385 aaPredicted RBP10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 ABRAXAS1Q6UWZ7 409 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 XKR5Q6UX68 686 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 FAM83HQ6ZRV2 1179 aaPredicted RBP10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 CDKL3Q8IVW4 592 aaPredicted RBP10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 SPC24Q8NBT2 197 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 LSM14AQ8ND56 463 aaKnown RBP10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 AGBL5Q8NDL9 886 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 JPH3Q8WXH2 748 aaPredicted RBP10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 ART4Q93070 314 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 AHCYL2Q96HN2 611 aaKnown RBP10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 CALR3Q96L12 384 aaKnown RBP10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 TAAR9Q96RI9 348 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 DPYSL5Q9BPU6 564 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 B3GNT4Q9C0J1 378 aa10.27□□□□□ -0.77
PRPF40B-204ENST00000527253 WDR70Q9NW82 654 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms