RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 RGSL1A5PLK6 1076 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 WIPF3A6NGB9 483 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 A6NL46 340 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 KMOO15229 486 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 TIAF1O95411 115 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 ATP1A3P13637 1013 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 FOLR1P15328 257 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 FERP16591 822 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 ZNF7P17097 686 aaPredicted RBP7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 LPOP22079 712 aaPredicted RBP7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 ELAVL4P26378 380 aaKnown RBP7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 RPL10P27635 214 aaKnown RBP7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 TNFRSF8P28908 595 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 CAPZBP47756 277 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 RPL26P61254 145 aaKnown RBP7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 ACY1Q03154 408 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 IL10RAQ13651 578 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 ESPL1Q14674 2120 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 NR6A1Q15406 480 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 DPYSL2Q16555 572 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 SMTNL2Q2TAL5 461 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 PLA2G4EQ3MJ16 856 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 BOLA3Q53S33 107 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 ZNF569Q5MCW4 686 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 CRTC3Q6UUV7 619 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 CYP4V2Q6ZWL3 525 aaPredicted RBP7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 HPS6Q86YV9 775 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 TICAM1Q8IUC6 712 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 LRRC49Q8IUZ0 686 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 RHOT1Q8IXI2 618 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 RBM12BQ8IXT5 1001 aaKnown RBP7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 ENOX1Q8TC92 643 aaKnown RBP7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 UBXN4Q92575 508 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 MR1Q95460 341 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 CXorf40BQ96DE9 158 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 TCTN2Q96GX1 697 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 C5orf34Q96MH7 638 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 CSPG4P5Q96PW8 444 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 LYSMD1Q96S90 227 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 MLPHQ9BV36 600 aaPredicted RBP7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 SPATA16Q9BXB7 569 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 CLSTN2Q9H4D0 955 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 PCDH9Q9HC56 1237 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 TRIM39Q9HCM9 518 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 SLC40A1Q9NP59 571 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 IGSF5Q9NSI5 407 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 POT1Q9NUX5 634 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 TRIM10Q9UDY6 481 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 EPHA6Q9UF33 1036 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 SLC23A2Q9UGH3 650 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 ERRFI1Q9UJM3 462 aaPredicted RBP7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 RPL26L1Q9UNX3 145 aaKnown RBP7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 SLC5A6Q9Y289 635 aa7.8□□□□□ -1.16
NSMCE2-213ENST00000523824 IGHV5-51A0A0C4DH38 117 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 SSU72P8A0A1W2PR75 194 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 OR52A4PA6NMU1 304 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 ANKRD66B4E2M5 251 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 GPR89AB7ZAQ6 455 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 ZNF185O15231 689 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 MATN3O15232 486 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 KRT86O43790 486 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 TMEM63AO94886 807 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 LDLRP01130 860 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 PRLP01236 227 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 FTLP02792 175 aaPredicted RBP7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 KLK3P07288 261 aaPredicted RBP7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 GPR89BP0CG08 455 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 IDSP22304 550 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 IL1R2P27930 398 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 PCK1P35558 622 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 PTGIRP43119 386 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 ZNF165P49910 485 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 DRG2P55039 364 aaKnown RBP7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 DSC2Q02487 901 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 UBXN1Q04323 297 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 ELOAQ14241 798 aaKnown RBP7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 GPR18Q14330 331 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 IHHQ14623 411 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 KCNAB1Q14722 419 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 CCDC122Q5T0U0 273 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 CDKAL1Q5VV42 579 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 SLC6A19Q695T7 634 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 KLHL35Q6PF15 583 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 ABRAXAS1Q6UWZ7 409 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 IRF2BP2Q7Z5L9 587 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 ADGRG6Q86SQ4 1221 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 LRRTM4Q86VH4 590 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 TMEM126BQ8IUX1 230 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 TTC30BQ8N4P2 665 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 Q8NA96 180 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 TTC13Q8NBP0 860 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 ANKRD20A12PQ8NF67 263 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 FDCSPQ8NFU4 85 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 PNPLA2Q96AD5 504 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 C19orf60Q96EN9 201 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 SLC41A2Q96JW4 573 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 ZNF514Q96K75 400 aaPredicted RBP7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 NUDT9Q9BW91 350 aa7.79□□□□□ -1.16
NSMCE2-213ENST00000523824 TDRD1Q9BXT4 1180 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms