RNA–Protein interactions for RNA: ENST00000523746.5

PTK2-250, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-250	ENST00000523746	KDM4B	O94953	1096 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	PRSS2	P07478	247 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	CDC25A	P30304	524 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	CORO1A	P31146	461 aa	Known RBP	4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	KIF5A	Q12840	1032 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	AIMP1	Q12904	312 aa	Known RBP	4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	GAGE2B	Q13066	116 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	MYBPH	Q13203	477 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	HLF	Q16534	295 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	GAGE2E	Q4V326	116 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	GAGE2A	Q6NT46	116 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	INTS8	Q75QN2	995 aa	Known RBP	4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	HAUS6	Q7Z4H7	955 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	LDB1	Q86U70	411 aa	Predicted RBP	4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	CEP57	Q86XR8	500 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	IQCF1	Q8N6M8	205 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746		Q8N9P0	234 aa	Predicted RBP	4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	TDRD5	Q8NAT2	981 aa	Known RBP	4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	OR10S1	Q8NGN2	331 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	GSDMB	Q8TAX9	411 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	DNAAF4	Q8WXU2	420 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	ABTB1	Q969K4	478 aa	Predicted RBP	4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	ARSG	Q96EG1	525 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	PGAP3	Q96FM1	320 aa	Predicted RBP	4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	C3orf30	Q96M34	536 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	QRFPR	Q96P65	431 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	DDO	Q99489	341 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	MTERF1	Q99551	399 aa	Known RBP	4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	BAG1	Q99933	345 aa	Predicted RBP	4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	NTPCR	Q9BSD7	190 aa	Known RBP	4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	HGH1	Q9BTY7	390 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	RCC2	Q9P258	522 aa	Known RBP	4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	C5AR2	Q9P296	337 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	LARS	Q9P2J5	1176 aa	Known RBP	4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	GAGE2D	Q9UEU5	116 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	HACL1	Q9UJ83	578 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	KLHL20	Q9Y2M5	609 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	AMDHD2	Q9Y303	409 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746	PTPRC	P08575	1304 aa		4.6	□□□□□ -1.67
PTK2-250	ENST00000523746		A6NL46	340 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746		A8MXE2	369 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	ZNF587B	E7ETH6	402 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	PMS2P2	O95744	297 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	BMP15	O95972	392 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	ABCB1	P08183	1280 aa	Predicted RBP	4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	FCGR1A	P12314	374 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	CTSC	P53634	463 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	TUBA1B	P68363	451 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	LTB	Q06643	244 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	DLG1	Q12959	904 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	SNTB1	Q13884	538 aa	Known RBP	4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	IL11RA	Q14626	422 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	MEP1A	Q16819	746 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	CRY2	Q49AN0	593 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	FAM98B	Q52LJ0	330 aa	Known RBP	4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	FAM133B	Q5BKY9	247 aa	Known RBP	4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	IGSF11	Q5DX21	431 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	C9orf152	Q5JTZ5	239 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	RHBDF2	Q6PJF5	856 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	GPR180	Q86V85	440 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	TAS1R2	Q8TE23	839 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	TMED6	Q8WW62	240 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	SLC44A1	Q8WWI5	657 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	LPGAT1	Q92604	370 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	PIGT	Q969N2	578 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	MTBP	Q96DY7	904 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	OR1F2P	Q96R84	312 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	CDRT15	Q96T59	188 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	SEZ6L	Q9BYH1	1024 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	OR10A4	Q9H209	315 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	RAD21L1	Q9H4I0	556 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	TAB2	Q9NYJ8	693 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	CFDP1	Q9UEE9	299 aa	Predicted RBP	4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	PPIE	Q9UNP9	301 aa	Known RBP	4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	B3GALT5	Q9Y2C3	310 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746	PCDHGA5	Q9Y5G8	931 aa		4.59	□□□□□ -1.67
PTK2-250	ENST00000523746		H7C0S8	307 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746		J3QR06	171 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	SMAD6	O43541	496 aa	Known RBP	4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	ZNF500	O60304	480 aa	Predicted RBP	4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	TBX10	O75333	385 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	PSMD10	O75832	226 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	WISP2	O76076	250 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	NTN1	O95631	604 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	ACAA1	P09110	424 aa	Predicted RBP	4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	NMBR	P28336	390 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	HTR6	P50406	440 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	RAD23A	P54725	363 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	ALCAM	Q13740	583 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	TCP11X2	Q5H9J9	407 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	TRNP1	Q6NT89	227 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	GFRAL	Q6UXV0	394 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	KRT77	Q7Z794	578 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	MCU	Q8NE86	351 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	UTP15	Q8TED0	518 aa	Known RBP	4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	ZNF479	Q96JC4	524 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	ZNF385A	Q96PM9	386 aa	Known RBP	4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	NEK1	Q96PY6	1258 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	SEMA3C	Q99985	751 aa		4.58	□□□□□ -1.68
PTK2-250	ENST00000523746	RABEP2	Q9H5N1	569 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms