RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 ARFGAP3Q9NP61 516 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 SMOXQ9NWM0 555 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 RABGEF1Q9UJ41 708 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 OR1A2Q9Y585 309 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 FRYLO94915 3013 aa11.81□□□□□ -0.52
PVT1-215ENST00000522963 A0A087WUV0 522 aaPredicted RBP11.8□□□□□ -0.52
PVT1-215ENST00000522963 A0A1B0GTQ1 180 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 TM4SF5O14894 197 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 DFNA5O60443 496 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 KCNK5O95279 499 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 OGNP20774 298 aaKnown RBP11.8□□□□□ -0.52
PVT1-215ENST00000522963 ACRV1P26436 265 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 SLC1A2P43004 574 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 RABIFP47224 123 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 THOP1P52888 689 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 PFN3P60673 137 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 MPP1Q00013 466 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 CDK3Q00526 305 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 BNIP3Q12983 259 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 CTBP1Q13363 440 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 KHDC1Q4VXA5 237 aaKnown RBP11.8□□□□□ -0.52
PVT1-215ENST00000522963 ZNF648Q5T619 568 aaPredicted RBP11.8□□□□□ -0.52
PVT1-215ENST00000522963 GPRC6AQ5T6X5 926 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 MRNIPQ6NTE8 343 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 KYAT3Q6YP21 454 aaKnown RBP11.8□□□□□ -0.52
PVT1-215ENST00000522963 ABI3BPQ7Z7G0 1075 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 TRIM74Q86UV6 250 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 HEATR4Q86WZ0 1026 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 CILP2Q8IUL8 1156 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 NAXDQ8IW45 347 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 LMNTD2Q8IXW0 634 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 NXPE1Q8N323 547 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 C2CD4AQ8NCU7 369 aaPredicted RBP11.8□□□□□ -0.52
PVT1-215ENST00000522963 DDHD1Q8NEL9 900 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 CALML6Q8TD86 181 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 RHBDD1Q8TEB9 315 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.8□□□□□ -0.522e-6■■■■□ 20.7
PVT1-215ENST00000522963 FUBP1Q96AE4 644 aaKnown RBP11.8□□□□□ -0.52
PVT1-215ENST00000522963 COX14Q96I36 57 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 APOOQ9BUR5 198 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 LGR4Q9BXB1 951 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 TEX101Q9BY14 249 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 ACSS3Q9H6R3 686 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 WDR26Q9H7D7 661 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 CAAP1Q9H8G2 361 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 DNAJC28Q9NX36 388 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 ZFATQ9P243 1243 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 FBXO5Q9UKT4 447 aa11.8□□□□□ -0.52
PVT1-215ENST00000522963 OAS3Q9Y6K5 1087 aaKnown RBP11.8□□□□□ -0.52
PVT1-215ENST00000522963 CFAP54Q96N23 3096 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 SPAARA0A1B0GVQ0 90 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 MTX2O75431 263 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 SLC25A14O95258 325 aaPredicted RBP11.79□□□□□ -0.52
PVT1-215ENST00000522963 S1PR4O95977 384 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 SHBGP04278 402 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 GABRB3P28472 473 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 PMLP29590 882 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 B4GALNT1Q00973 533 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 SLC14A1Q13336 389 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 TYSND1Q2T9J0 566 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 ZNF789Q5FWF6 425 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 AARS2Q5JTZ9 985 aaKnown RBP11.79□□□□□ -0.52
PVT1-215ENST00000522963 LDLRAP1Q5SW96 308 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 TPRG1LQ5T0D9 272 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 LYPLAL1Q5VWZ2 237 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 FBXO38Q6PIJ6 1188 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 CERS6Q6ZMG9 384 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 SDCCAG8Q86SQ7 713 aaPredicted RBP11.79□□□□□ -0.52
PVT1-215ENST00000522963 PHYKPLQ8IUZ5 450 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 CTAGE3PQ8IX95 158 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 SLC22A18ASQ8N1D0 253 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 PPM1NQ8N819 430 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 GDAP1Q8TB36 358 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 CDKL2Q92772 493 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 HIC2Q96JB3 615 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 CYTH2Q99418 400 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 BOCQ9BWV1 1114 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 FBXO6Q9NRD1 293 aaPredicted RBP11.79□□□□□ -0.52
PVT1-215ENST00000522963 PHPT1Q9NRX4 125 aaPredicted RBP11.79□□□□□ -0.52
PVT1-215ENST00000522963 ARGLU1Q9NWB6 273 aaPredicted RBP11.79□□□□□ -0.52
PVT1-215ENST00000522963 ZDHHC3Q9NYG2 299 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 BTBD3Q9Y2F9 522 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 PSAT1Q9Y617 370 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 SCN8AQ9UQD0 1980 aa11.79□□□□□ -0.52
PVT1-215ENST00000522963 GOLGA4Q13439 2230 aaKnown RBP11.79□□□□□ -0.52
PVT1-215ENST00000522963 IGLV3-16A0A075B6K0 115 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 SCAMP1O15126 338 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 OR1I1O60431 355 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 NDUFS3O75489 264 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 HAUS5O94927 633 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 AHSGP02765 367 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 HOXC4P09017 264 aaPredicted RBP11.78□□□□□ -0.52
PVT1-215ENST00000522963 ZNF883P0CG24 379 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 MYCLP1P12525 358 aaPredicted RBP11.78□□□□□ -0.52
PVT1-215ENST00000522963 CSRP1P21291 193 aaKnown RBP11.78□□□□□ -0.52
PVT1-215ENST00000522963 EPHA8P29322 1005 aaPredicted RBP11.78□□□□□ -0.52
PVT1-215ENST00000522963 TTPAP49638 278 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 KIAA1024LP59773 190 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 YPEL5P62699 121 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 FZD2Q14332 565 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms