RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 RINLQ6ZS11 566 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 SCAMP5Q8TAC9 235 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 MYDGFQ969H8 173 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 TBC1D10AQ9BXI6 508 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 KCNN2Q9H2S1 579 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 LRRC4CQ9HCJ2 640 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 HMG20AQ9NP66 347 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 COPS7AQ9UBW8 275 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 OR1F1O43749 312 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 ACTR1BP42025 376 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 AVPR1BP47901 424 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 DHPSP49366 369 aaPredicted RBP16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 TAS2R50P59544 299 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 ACTR1AP61163 376 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 EOGTQ5NDL2 527 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 MBLAC2Q68D91 279 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 XAGE5Q8WWM1 108 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 MPP4Q96JB8 637 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 HOPXQ9BPY8 73 aaPredicted RBP16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 WDR26Q9H7D7 661 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 ELL3Q9HB65 397 aaPredicted RBP16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 SAMD4AQ9UPU9 718 aaKnown RBP16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 COQ4Q9Y3A0 265 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 WNT9AO14904 365 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 PIAS1O75925 651 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 UBXN7O94888 489 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 CST1P01037 141 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 ANXA4P09525 319 aaPredicted RBP16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 HSD17B2P37059 387 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 CSKP41240 450 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 SPIRE1Q08AE8 756 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 PRR23BQ6ZRT6 265 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 PYROXD2Q8N2H3 581 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 OR2T12Q8NG77 320 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 BPIFB1Q8TDL5 484 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 FKBPLQ9UIM3 349 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 PBX1P40424 430 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 STAT5AP42229 794 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 PSMD4P55036 377 aaKnown RBP16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 PACS2Q86VP3 889 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 IRF7Q92985 503 aa16.11■□□□□ 0.17
PCDHA3-201ENST00000522353 A0A1W2PQ45 241 aaPredicted RBP16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 A0A1W2PQY0 241 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 ILVBLA1L0T0 632 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 UGT2B17O75795 530 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 F2P00734 622 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 FGFR3P22607 806 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 ADSSP30520 456 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 ASPAP45381 313 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 LIMK2P53671 638 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 LRRC32Q14392 662 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 ACAP2Q15057 778 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 TAF5Q15542 800 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 BROXQ5VW32 411 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 CLEC20AQ6ZU45 233 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 C12orf66Q96MD2 445 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 PSMD13Q9UNM6 376 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 FAM86C2PA6NEL3 165 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 DDX3YO15523 660 aaKnown RBP16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 ALOX12P18054 663 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 MYBPC1Q00872 1141 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 CHIT1Q13231 466 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 AAK1Q2M2I8 961 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 GPR33Q49SQ1 333 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 AHI1Q8N157 1196 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 CRYBG2Q8N1P7 616 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 CPT1BQ92523 772 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 DNASE1L2Q92874 299 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 GINS4Q9BRT9 223 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 DGCR6LQ9BY27 220 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 SUV39H2Q9H5I1 410 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 R3HDM2Q9Y2K5 976 aaKnown RBP16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 ZNF536O15090 1300 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 MYOM1P52179 1685 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 GOT2P00505 430 aaKnown RBP16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 ABRAXAS1Q6UWZ7 409 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 UBR7Q8N806 425 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 SLC9A6Q92581 669 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 RCN3Q96D15 328 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 SAMD11Q96NU1 681 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 PTGFRNQ9P2B2 879 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 PCDHGA11Q9Y5H2 935 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 SLIT2O94813 1529 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 TIE1P35590 1138 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 GJA9P57773 515 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 RHAGQ02094 409 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 LCP2Q13094 533 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 HEPACAMQ14CZ8 416 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 SIX5Q8N196 739 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 SFRP1Q8N474 314 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 GNAZP19086 355 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 HSPA7P48741 367 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 JAM2P57087 298 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 PTGES3Q15185 160 aaKnown RBP16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 AZIN2Q96A70 460 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 NUS1Q96E22 293 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 FNIP2Q9P278 1114 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 SPATA2Q9UM82 520 aa16.1■□□□□ 0.17
PCDHA3-201ENST00000522353 STON1Q9Y6Q2 735 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms