RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 MPOP05164 745 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 HOXB1P14653 301 aaPredicted RBP12.92□□□□□ -0.34
CPNE3-205ENST00000522240 STMN1P16949 149 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 CRABP2P29373 138 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 TYK2P29597 1187 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 OAS2P29728 719 aaKnown RBP12.92□□□□□ -0.34
CPNE3-205ENST00000522240 AKT1P31749 480 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 SLC12A2P55011 1212 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 RAB10P61026 200 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 IRF4Q15306 451 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 TAF1BQ53T94 588 aaPredicted RBP12.92□□□□□ -0.34
CPNE3-205ENST00000522240 CTSL3PQ5NE16 218 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 PNCKQ6P2M8 343 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 MACC1Q6ZN28 852 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 SH2D5Q6ZV89 423 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 LCA5Q86VQ0 697 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 SLC41A1Q8IVJ1 513 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 KRT222Q8N1A0 295 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 COX14Q96I36 57 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 APOPT1Q96IL0 206 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 SERAC1Q96JX3 654 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 CFAP54Q96N23 3096 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 NDNQ99608 321 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 BOCQ9BWV1 1114 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 FAM126AQ9BYI3 521 aaPredicted RBP12.92□□□□□ -0.34
CPNE3-205ENST00000522240 TPSD1Q9BZJ3 242 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 IRF2BPLQ9H1B7 796 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 SMG5Q9UPR3 1016 aaKnown RBP12.92□□□□□ -0.34
CPNE3-205ENST00000522240 A0A087X1B8 175 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 FAM47DPA6NHR8 397 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 K7ESM1 405 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 PRPF4O43172 522 aaKnown RBP eCLIP12.91□□□□□ -0.34
CPNE3-205ENST00000522240 OR1I1O60431 355 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 VPS26AO75436 327 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 PCCBP05166 539 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 BRAFP15056 766 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 KRT4P19013 534 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 NR1D1P20393 614 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 HNRNPA2B1P22626 353 aaKnown RBP12.91□□□□□ -0.34
CPNE3-205ENST00000522240 IGFALSP35858 605 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 TRIM23P36406 574 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 SLC26A3P40879 764 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 TAS2R39P59534 338 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 B4GALNT1Q00973 533 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 KIAA0895LQ68EN5 471 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 PTRHD1Q6GMV3 140 aaKnown RBP12.91□□□□□ -0.34
CPNE3-205ENST00000522240 CMC1Q7Z7K0 106 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 PELI3Q8N2H9 469 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 FBXL6Q8N531 539 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 ARFGAP2Q8N6H7 521 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 PNPLA1Q8N8W4 532 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 ACVR1CQ8NER5 493 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 GDAP1Q8TB36 358 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 CENPTQ96BT3 561 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 DCUN1D1Q96GG9 259 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 TOE1Q96GM8 510 aaKnown RBP12.91□□□□□ -0.34
CPNE3-205ENST00000522240 SPACA7Q96KW9 195 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 PANX3Q96QZ0 392 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 KLF6Q99612 283 aaPredicted RBP12.91□□□□□ -0.34
CPNE3-205ENST00000522240 OLFM1Q99784 485 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 CAB39LQ9H9S4 337 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 PCMTD2Q9NV79 361 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 TAS2R13Q9NYV9 303 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 CNOT6Q9ULM6 557 aaKnown RBP12.91□□□□□ -0.34
CPNE3-205ENST00000522240 DMTF1Q9Y222 760 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 ANKRD6Q9Y2G4 727 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 VWA7Q9Y334 891 aa12.91□□□□□ -0.34
CPNE3-205ENST00000522240 A0A096LPK6 155 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 FOXO6A8MYZ6 492 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 TOR1BO14657 336 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 AXIN1O15169 862 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 TYROBPO43914 113 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 VEGFDO43915 354 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 GLRA3O75311 464 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 RHOBTB1O94844 696 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 SLC25A14O95258 325 aaPredicted RBP12.9□□□□□ -0.34
CPNE3-205ENST00000522240 WISP3O95389 354 aaPredicted RBP12.9□□□□□ -0.34
CPNE3-205ENST00000522240 PAK4O96013 591 aaPredicted RBP12.9□□□□□ -0.34
CPNE3-205ENST00000522240 C2P06681 752 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 GSTA1P08263 222 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 OR56A5P0C7T3 313 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 SLC35E2BP0CK96 405 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 COL6A2P12110 1019 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 ATP1B2P14415 290 aaPredicted RBP12.9□□□□□ -0.34
CPNE3-205ENST00000522240 MSH3P20585 1137 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 MAT2AP31153 395 aaKnown RBP12.9□□□□□ -0.34
CPNE3-205ENST00000522240 FMO4P31512 558 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 SLC18A1P54219 525 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 CDKN2DP55273 166 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 PPP2R2AP63151 447 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 CDK3Q00526 305 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 NUMA1Q14980 2115 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 UGT3A1Q6NUS8 523 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 HEATR4Q86WZ0 1026 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 C4orf33Q8N1A6 199 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 BANPQ8N9N5 519 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 PLA2G15Q8NCC3 412 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 PRSS33Q8NF86 280 aa12.9□□□□□ -0.34
CPNE3-205ENST00000522240 CCDC97Q96F63 343 aaPredicted RBP12.9□□□□□ -0.34
CPNE3-205ENST00000522240 HIC2Q96JB3 615 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms