RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 THSD1Q9NS62 852 aa17.63■□□□□ 0.41
TRAPPC9-211ENST00000521700 KCNK4Q9NYG8 393 aa17.63■□□□□ 0.41
TRAPPC9-211ENST00000521700 PRR19A6NJB7 356 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 CDRT15L2A8MXV6 281 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 AGRPO00253 132 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 PLD2O14939 933 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 LIASO43766 372 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 HGFP14210 728 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 HOXB3P14651 431 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 PCBP4P57723 403 aaKnown RBP17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 HHEXQ03014 270 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 CFHR1Q03591 330 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 CCDC173Q0VFZ6 552 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 ITGA9Q13797 1035 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 OASLQ15646 514 aaKnown RBP17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 INSCQ1MX18 579 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 GPRC6AQ5T6X5 926 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 RASGEF1AQ8N9B8 481 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 ZNF248Q8NDW4 579 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 C1orf54Q8WWF1 131 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 SLC38A3Q99624 504 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 TIMM29Q9BSF4 260 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 OSGEPL1Q9H4B0 414 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 SARS2Q9NP81 518 aaKnown RBP17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 SCHIP1Q9P0W5 487 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 FEZ2Q9UHY8 353 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 FKBPLQ9UIM3 349 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 DNAJC16Q9Y2G8 782 aa17.62■□□□□ 0.41
TRAPPC9-211ENST00000521700 KIR2DS5A0A0G2JLQ3 304 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 A0A0G2JNG1 304 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 OR5K4A6NMS3 321 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 KIR2DS3K7RE56 304 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 CRTAMO95727 393 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 SLC2A4P14672 509 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 STIP1P31948 543 aaKnown RBP17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 MLLT3P42568 568 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 ABCG1P45844 678 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 XIAPP98170 497 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 NFATC2Q13469 925 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 GTF2H3Q13889 308 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 KIR2DS5Q14953 304 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 P3H1Q32P28 736 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 LDLRAP1Q5SW96 308 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 PHF19Q5T6S3 580 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 SLC9B2Q86UD5 537 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 TRAPPC5Q8IUR0 188 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 TAB3Q8N5C8 712 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 DDHD1Q8NEL9 900 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 OR13C4Q8NGS5 318 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 LRRC45Q96CN5 670 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 RTP4Q96DX8 246 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 CRELD1Q96HD1 420 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 NAF1Q96HR8 494 aaKnown RBP17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 TTC25Q96NG3 672 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 ALS2CR12Q96Q35 445 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 FRMD8P1Q9BZ68 369 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 SMOXQ9NWM0 555 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 CPNE7Q9UBL6 633 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 LOXL2Q9Y4K0 774 aa17.61■□□□□ 0.41
TRAPPC9-211ENST00000521700 IGHV5-10-1A0A0J9YXX1 117 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 PSMD3O43242 534 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 LDB2O43679 373 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 SRP72O76094 671 aaKnown RBP17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 PRAMEF1O95521 474 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 ITGA2BP08514 1039 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 TPH1P17752 444 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 CSF2RBP32927 897 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 ZNF140P52738 457 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 CTSCP53634 463 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 GPLD1P80108 840 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 TMPRSS15P98073 1019 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 PDE1BQ01064 536 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 C16orf72Q14CZ0 275 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 ABRAXAS1Q6UWZ7 409 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 CLEC14AQ86T13 490 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 SPACA3Q8IXA5 215 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 TMEM159Q96B96 161 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 SH3KBP1Q96B97 665 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 CMKLR1Q99788 373 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 TLR10Q9BXR5 811 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 STN1Q9H668 368 aaKnown RBP17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 ASB8Q9H765 288 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 LRRC40Q9H9A6 602 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 ZNF148Q9UQR1 794 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 PPP2R2CQ9Y2T4 447 aa17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 ZNF106Q9H2Y7 1883 aaKnown RBP17.6■□□□□ 0.41
TRAPPC9-211ENST00000521700 POP7O75817 140 aaKnown RBP17.59■□□□□ 0.41
TRAPPC9-211ENST00000521700 AP2A1O95782 977 aa17.59■□□□□ 0.41
TRAPPC9-211ENST00000521700 XRCC1P18887 633 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC9-211ENST00000521700 ITIH1P19827 911 aa17.59■□□□□ 0.41
TRAPPC9-211ENST00000521700 MPSTP25325 297 aa17.59■□□□□ 0.41
TRAPPC9-211ENST00000521700 SLC19A1P41440 591 aa17.59■□□□□ 0.41
TRAPPC9-211ENST00000521700 LIMK2P53671 638 aa17.59■□□□□ 0.41
TRAPPC9-211ENST00000521700 UBE2IP63279 158 aaKnown RBP17.59■□□□□ 0.41
TRAPPC9-211ENST00000521700 SNX1Q13596 522 aa17.59■□□□□ 0.41
TRAPPC9-211ENST00000521700 SIX1Q15475 284 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC9-211ENST00000521700 SEPT7Q16181 437 aaKnown RBP17.59■□□□□ 0.41
TRAPPC9-211ENST00000521700 TMEM71Q6P5X7 295 aa17.59■□□□□ 0.41
TRAPPC9-211ENST00000521700 TMEM220Q6QAJ8 160 aa17.59■□□□□ 0.41
TRAPPC9-211ENST00000521700 PDZD3Q86UT5 571 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms