RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 VCLP18206 1134 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 TSPAN7P41732 249 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 ATP1A2P50993 1020 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 RAB15P59190 212 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 XRCC4Q13426 336 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 LY6DQ14210 128 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 SLC1A5Q15758 541 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 ATP13A5Q4VNC0 1218 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 BBS12Q6ZW61 710 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 GLT6D1Q7Z4J2 308 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 VASH2Q86V25 355 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 TMTC1Q8IUR5 882 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 IPMKQ8NFU5 416 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 BRSK1Q8TDC3 778 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 BLOC1S5Q8TDH9 187 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 MRGPRX2Q96LB1 330 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 TIMM29Q9BSF4 260 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 FSD1LQ9BXM9 530 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 OCIAD1Q9NX40 245 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 SLC23A2Q9UGH3 650 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 PKP3Q9Y446 797 aa20.23■□□□□ 0.83
SNHG6-203ENST00000520944 GCN1Q92616 2671 aaKnown RBP20.23■□□□□ 0.83
SNHG6-203ENST00000520944 CFAP46Q8IYW2 2715 aa20.22■□□□□ 0.83
SNHG6-203ENST00000520944 APOC4-APOC2K7ER74 178 aa20.22■□□□□ 0.83
SNHG6-203ENST00000520944 APOC2P02655 101 aa20.22■□□□□ 0.83
SNHG6-203ENST00000520944 XRCC1P18887 633 aaPredicted RBP20.22■□□□□ 0.83
SNHG6-203ENST00000520944 HLA-DPA1P20036 260 aa20.22■□□□□ 0.83
SNHG6-203ENST00000520944 CHRNA4P43681 627 aa20.22■□□□□ 0.83
SNHG6-203ENST00000520944 TMEM115Q12893 351 aaPredicted RBP20.22■□□□□ 0.83
SNHG6-203ENST00000520944 SRSF6Q13247 344 aaKnown RBP20.22■□□□□ 0.83
SNHG6-203ENST00000520944 NOMO1Q15155 1222 aa20.22■□□□□ 0.83
SNHG6-203ENST00000520944 TRAPPC5Q8IUR0 188 aa20.22■□□□□ 0.83
SNHG6-203ENST00000520944 JPH3Q8WXH2 748 aaPredicted RBP20.22■□□□□ 0.83
SNHG6-203ENST00000520944 OXNAD1Q96HP4 312 aaPredicted RBP20.22■□□□□ 0.83
SNHG6-203ENST00000520944 TBC1D10AQ9BXI6 508 aa20.22■□□□□ 0.83
SNHG6-203ENST00000520944 IL26Q9NPH9 171 aa20.22■□□□□ 0.83
SNHG6-203ENST00000520944 PCDHA3Q9Y5H8 950 aa20.22■□□□□ 0.83
SNHG6-203ENST00000520944 B3GALT1Q9Y5Z6 326 aa20.22■□□□□ 0.83
SNHG6-203ENST00000520944 SOWAHDA6NJG2 315 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 PPFIA2O75334 1257 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 ANXA9O76027 345 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 IDSP22304 550 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 CTNNA2P26232 953 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 RBL1P28749 1068 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 CTNNA1P35221 906 aaKnown RBP20.21■□□□□ 0.83
SNHG6-203ENST00000520944 SPAM1P38567 509 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 CETN2P41208 172 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 ZNF75DP51815 510 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 UBE2IP63279 158 aaKnown RBP20.21■□□□□ 0.83
SNHG6-203ENST00000520944 SEPT7Q16181 437 aaKnown RBP20.21■□□□□ 0.83
SNHG6-203ENST00000520944 ITPRIPL1Q6GPH6 555 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 ARHGAP22Q7Z5H3 698 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 PLXDC1Q8IUK5 500 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 TTC30BQ8N4P2 665 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 IL22RA1Q8N6P7 574 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 DTX3LQ8TDB6 740 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 MED8Q96G25 268 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 MRFAP1L1Q96HT8 127 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 ARHGAP9Q9BRR9 750 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 ZCCHC2Q9C0B9 1178 aaKnown RBP20.21■□□□□ 0.83
SNHG6-203ENST00000520944 UCK1Q9HA47 277 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 IL17CQ9P0M4 197 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 KLHL3Q9UH77 587 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 EFR3BQ9Y2G0 817 aa20.21■□□□□ 0.83
SNHG6-203ENST00000520944 GLYATL1P3A0A0U1RQE8 302 aa20.2■□□□□ 0.82
SNHG6-203ENST00000520944 MACROD2A1Z1Q3 448 aa20.2■□□□□ 0.82
SNHG6-203ENST00000520944 LILRA5A6NI73 299 aa20.2■□□□□ 0.82
SNHG6-203ENST00000520944 STK10O94804 968 aaKnown RBP20.2■□□□□ 0.82
SNHG6-203ENST00000520944 ITGB2P05107 769 aa20.2■□□□□ 0.82
SNHG6-203ENST00000520944 AMD1P17707 334 aa20.2■□□□□ 0.82
SNHG6-203ENST00000520944 RPL10P27635 214 aaKnown RBP20.2■□□□□ 0.82
SNHG6-203ENST00000520944 GEMP55040 296 aa20.2■□□□□ 0.82
SNHG6-203ENST00000520944 KHDC1Q4VXA5 237 aaKnown RBP20.2■□□□□ 0.82
SNHG6-203ENST00000520944 LDLRAP1Q5SW96 308 aa20.2■□□□□ 0.82
SNHG6-203ENST00000520944 ZNF547Q8IVP9 402 aa20.2■□□□□ 0.82
SNHG6-203ENST00000520944 NKD1Q969G9 470 aa20.2■□□□□ 0.82
SNHG6-203ENST00000520944 TEFMQ96QE5 360 aaKnown RBP20.2■□□□□ 0.82
SNHG6-203ENST00000520944 SCHIP1Q9P0W5 487 aaPredicted RBP20.2■□□□□ 0.82
SNHG6-203ENST00000520944 TMPRSS11EQ9UL52 423 aa20.2■□□□□ 0.82
SNHG6-203ENST00000520944 PCDHGA4Q9Y5G9 962 aa20.2■□□□□ 0.82
SNHG6-203ENST00000520944 PIEZO2Q9H5I5 2752 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 CCDC66A2RUB6 948 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 UGT1A9O60656 530 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 KCNJ13O60928 360 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 UBXN7O94888 489 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 UGT1A6P19224 532 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 UGT1A1P22309 533 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 UGT1A4P22310 534 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 UGT1A3P35503 534 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 SLC19A1P41440 591 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 RWDD2BP57060 319 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 MC2RQ01718 297 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 ITGA9Q13797 1035 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 PRPSAP1Q14558 356 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 CHRNA6Q15825 494 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 ANKS6Q68DC2 871 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 ABRAXAS1Q6UWZ7 409 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 XKR5Q6UX68 686 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 FAM151BQ6UXP7 276 aa20.19■□□□□ 0.82
SNHG6-203ENST00000520944 CEACAM20Q6UY09 585 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms