RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 CACNA2D3Q8IZS8 1091 aa15.91■□□□□ 0.14
IGHV3-42-201ENST00000520410 KRT35Q92764 455 aa15.91■□□□□ 0.14
IGHV3-42-201ENST00000520410 WBP1Q96G27 269 aa15.91■□□□□ 0.14
IGHV3-42-201ENST00000520410 PLEKHG4BQ96PX9 1271 aa15.91■□□□□ 0.14
IGHV3-42-201ENST00000520410 VAT1Q99536 393 aa15.91■□□□□ 0.14
IGHV3-42-201ENST00000520410 ZCCHC2Q9C0B9 1178 aaKnown RBP15.91■□□□□ 0.14
IGHV3-42-201ENST00000520410 TRABDQ9H4I3 376 aa15.91■□□□□ 0.14
IGHV3-42-201ENST00000520410 FAM8A1Q9UBU6 413 aa15.91■□□□□ 0.14
IGHV3-42-201ENST00000520410 GLYATL1P3A0A0U1RQE8 302 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 HACD1B0YJ81 288 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 STX7O15400 261 aaKnown RBP15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 RAD1O60671 282 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 HLA-DPA1P20036 260 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 RBL1P28749 1068 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 SEPHS1P49903 392 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 GEMP55040 296 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 HADHBP55084 474 aaKnown RBP15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 MPP3Q13368 585 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 PRPSAP1Q14558 356 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 KDELC1Q6UW63 502 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 PRICKLE2Q7Z3G6 844 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 KIAA1328Q86T90 577 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 PLXDC1Q8IUK5 500 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 CDKL3Q8IVW4 592 aaPredicted RBP15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 SNRNP27Q8WVK2 155 aaKnown RBP15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 KIAA1143Q96AT1 154 aaPredicted RBP15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 MED8Q96G25 268 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 OXNAD1Q96HP4 312 aaPredicted RBP15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 TGM7Q96PF1 710 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 FCRL5Q96RD9 977 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 FAM118BQ9BPY3 351 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 TIMM29Q9BSF4 260 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 DDA1Q9BW61 102 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 FAM117AQ9C073 453 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 HACD3Q9P035 362 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 SCHIP1Q9P0W5 487 aaPredicted RBP15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 SLC23A2Q9UGH3 650 aa15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 ARHGEF17Q96PE2 2063 aaPredicted RBP15.9■□□□□ 0.14
IGHV3-42-201ENST00000520410 OR2AG2A6NM03 316 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 OR52A4PA6NMU1 304 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 GPR39O43194 453 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 UBXN7O94888 489 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 PLA2G2AP14555 144 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 UGT1A3P35503 534 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 HMGCLP35914 325 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 ZNF75DP51815 510 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 GFERP55789 205 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 OTUD4Q01804 1114 aaKnown RBP15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 TMEM115Q12893 351 aaPredicted RBP15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 NFATC3Q12968 1075 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 ITGA9Q13797 1035 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 PLCL1Q15111 1095 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 SLC1A5Q15758 541 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 CHRNA6Q15825 494 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 KHDC1Q4VXA5 237 aaKnown RBP15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 ZDHHC20Q5W0Z9 365 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 DARS2Q6PI48 645 aaKnown RBP15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 WDR74Q6RFH5 385 aaPredicted RBP15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 CEACAM20Q6UY09 585 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 DET1Q7L5Y6 550 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 TADA1Q96BN2 335 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 LRRC45Q96CN5 670 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 MRGPRX2Q96LB1 330 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 VPS35Q96QK1 796 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 APOL2Q9BQE5 337 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 EPB41L1Q9H4G0 881 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 NFKBIL1Q9UBC1 381 aaPredicted RBP15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 TRHDEQ9UKU6 1024 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 PSMD13Q9UNM6 376 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 SSUH2Q9Y2M2 353 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 IGSF10Q6WRI0 2623 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 SCN8AQ9UQD0 1980 aa15.89■□□□□ 0.13
IGHV3-42-201ENST00000520410 UNC13CQ8NB66 2214 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 PTPRQQ9UMZ3 2332 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 A6NCN8 305 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 LILRA5A6NI73 299 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 B4E171 279 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 APOC4-APOC2K7ER74 178 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 CHUKO15111 745 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 POLR1CO15160 346 aaPredicted RBP15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 KCNN4O15554 427 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 SLC28A2O43868 658 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 UGT1A9O60656 530 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 ANXA9O76027 345 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 NDUFA10O95299 355 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 APOC2P02655 101 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 FAM87AP0C7U9 286 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 LIFP15018 202 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 UGT1A6P19224 532 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 MSH3P20585 1137 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 UGT1A1P22309 533 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 UGT1A4P22310 534 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 TSPAN7P41732 249 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 EIF3EP60228 445 aaKnown RBP15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 SQSTM1Q13501 440 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 TAZQ16635 292 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 LDLRAP1Q5SW96 308 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 IRGCQ6NXR0 463 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 TMEM26Q6ZUK4 368 aa15.88■□□□□ 0.13
IGHV3-42-201ENST00000520410 BBS12Q6ZW61 710 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms