RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 IFI16Q16666 785 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 AMZ1Q400G9 498 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 PYCR3Q53H96 274 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 ANKRD20A8PQ5CZ79 823 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 KIAA1614Q5VZ46 1190 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 TIGD7Q6NT04 549 aaPredicted RBP9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 SLC30A9Q6PML9 568 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 GK5Q6ZS86 529 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 ZNF605Q86T29 641 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 NRSN1Q8IZ57 195 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 NAGSQ8N159 534 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 NDUFAF2Q8N183 169 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 PQLC3Q8N755 202 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 KCTD6Q8NC69 237 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 ZNF564Q8TBZ8 553 aaPredicted RBP9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 PATE1Q8WXA2 126 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 USP7Q93009 1102 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 AP2M1Q96CW1 435 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 COX14Q96I36 57 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 OR2M4Q96R27 311 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 LYSMD1Q96S90 227 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 AGAP2Q99490 1192 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 NUDT22Q9BRQ3 303 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 ZNF670Q9BS34 389 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 B3GNT4Q9C0J1 378 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 POLR1EQ9GZS1 481 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 RDH14Q9HBH5 336 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 GOLGA6AQ9NYA3 693 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 FOXJ2Q9P0K8 574 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 UVRAGQ9P2Y5 699 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 AMACRQ9UHK6 382 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 CD84Q9UIB8 345 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 CNOT6Q9ULM6 557 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 CHKBQ9Y259 395 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 HELZ2Q9BYK8 2649 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 MYLKQ15746 1914 aa9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 TP53BP1Q12888 1972 aaPredicted RBP9.21□□□□□ -0.94
CTNNA1-221ENST00000520339 PRAMEF33A0A0G2JMD5 474 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 AGRPO00253 132 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 PPM1DO15297 605 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 PRAMEF10O60809 474 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 WFS1O76024 890 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 PYGLP06737 847 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 CTSBP07858 339 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 H2AFZP0C0S5 128 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 LIPCP11150 499 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 CCL4P13236 92 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 ZNF30P17039 623 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 ACTR1BP42025 376 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 ACTR1AP61163 376 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 RPL26P61254 145 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 CLCQ05315 142 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 PEX6Q13608 980 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 LY6DQ14210 128 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 ASTE1Q2TB18 679 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 MAP9Q49MG5 647 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 PHF19Q5T6S3 580 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 LCE2CQ5TA81 110 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 DOK6Q6PKX4 331 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 H2AFVQ71UI9 128 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 TRIM74Q86UV6 250 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 PIM3Q86V86 326 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 ZFAND4Q86XD8 727 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 DTX1Q86Y01 620 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 MAP7D3Q8IWC1 876 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 RAVER1Q8IY67 606 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 RAPGEF5Q92565 580 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 WDR24Q96S15 920 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 RIOK2Q9BVS4 552 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 TDRD1Q9BXT4 1180 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 PACSIN1Q9BY11 444 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 IFNKQ9P0W0 207 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 DNPEPQ9ULA0 475 aa9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 RPL26L1Q9UNX3 145 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-221ENST00000520339 IGHV1OR21-1A0A087WYE8 117 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 IGHV5-10-1A0A0J9YXX1 117 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 HGSO14964 777 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 ZW10O43264 779 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 CLDN7O95471 211 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 JCHAINP01591 159 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 HLA-DQB2P05538 268 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 MMP2P08253 660 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 KRT7P08729 469 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 KDELR1P24390 212 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 CD82P27701 267 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 CASP14P31944 242 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 MAN1A1P33908 653 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 CD68P34810 354 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 GJC1P36383 396 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 SPINT3P49223 89 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 LIMK2P53671 638 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 MAPK10P53779 464 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 EPHB1P54762 984 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 TRA2AQ13595 282 aaKnown RBP eCLIP9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 SLC18A3Q16572 532 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 LINC00303Q3SY05 128 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 NKAIN2Q5VXU1 208 aa9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 MARK2Q7KZI7 788 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-221ENST00000520339 CCDC13Q8IYE1 715 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms