RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 SH2D5Q6ZV89 423 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 YTHDF3Q7Z739 585 aaKnown RBP7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 KCNMB4Q86W47 210 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 RASSF3Q86WH2 238 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 CNTN4Q8IWV2 1026 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 RYBPQ8N488 228 aaPredicted RBP7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 SLC44A3Q8N4M1 653 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 BLOC1S5Q8TDH9 187 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 PDCD6IPQ8WUM4 868 aaKnown RBP7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 PEX13Q92968 403 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 EID2BQ96D98 161 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 RMDN1Q96DB5 314 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 ZNF641Q96N77 438 aaPredicted RBP7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 HEPHQ9BQS7 1158 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 ASPNQ9BXN1 380 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 STMN4Q9H169 189 aaPredicted RBP7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 ATP13A3Q9H7F0 1226 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 BRD9Q9H8M2 597 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 MAGEE1Q9HCI5 957 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 PPANQ9NQ55 473 aaKnown RBP7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 TRPV5Q9NQA5 729 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 C20orf96Q9NUD7 363 aaPredicted RBP7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 NLE1Q9NVX2 485 aaPredicted RBP7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 THAP10Q9P2Z0 257 aaPredicted RBP7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 REV1Q9UBZ9 1251 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 PLA2G4CQ9UP65 541 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 PPIL1Q9Y3C6 166 aa7.84□□□□□ -1.15
CTHRC1-203ENST00000520337 TSPAN11A1L157 253 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 CCDC162PA2VCL2 907 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 TBC1D3BA6NDS4 549 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 CCL22O00626 93 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 SLC7A4O43246 635 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 BUD23O43709 281 aaKnown RBP7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 HTR3BO95264 441 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 CRTAMO95727 393 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 TSPAN15O95858 294 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 UGT2B4P06133 528 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 INHBAP08476 426 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 F7P08709 466 aaPredicted RBP7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 ALPIP09923 528 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 CTPS1P17812 591 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 PAMP19021 973 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 NR1D1P20393 614 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 LPOP22079 712 aaPredicted RBP7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 SERPINA4P29622 427 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 ATP5DP30049 168 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 HNF1BP35680 557 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 NNMTP40261 264 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 PPP2R2AP63151 447 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 ENPP2Q13822 863 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 ZNF234Q14588 700 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 GRM3Q14832 879 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 NUMA1Q14980 2115 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 SMAD2Q15796 467 aaKnown RBP7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 HNRNPA1L2Q32P51 320 aaKnown RBP7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 C9orf64Q5T6V5 341 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 NEPROQ6NW34 567 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 PACS1Q6VY07 963 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 GDPD4Q6W3E5 623 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 KDM7AQ6ZMT4 941 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 TIFABQ6ZNK6 161 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 REC114Q7Z4M0 266 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 TSPYL5Q86VY4 417 aaPredicted RBP7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 ARFGAP2Q8N6H7 521 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 ZNF366Q8N895 744 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 OR4K2Q8NGD2 314 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 OR13C4Q8NGS5 318 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 ABHD4Q8TB40 342 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 STYXQ8WUJ0 223 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 CDKL2Q92772 493 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 HDAC10Q969S8 669 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 CDKN2AIPNLQ96HQ2 116 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 SERAC1Q96JX3 654 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 DNAJC1Q96KC8 554 aaKnown RBP7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 CCDC74BQ96LY2 380 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 TBATAQ96M53 351 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 KLHL32Q96NJ5 620 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 LYSMD1Q96S90 227 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 ACOX2Q99424 681 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 CPNE1Q99829 537 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 PHF7Q9BWX1 381 aaPredicted RBP7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 TRABDQ9H4I3 376 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 ZDHHC6Q9H6R6 413 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 SUDS3Q9H7L9 328 aaPredicted RBP7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 KCNK12Q9HB15 430 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 IARS2Q9NSE4 1012 aaKnown RBP7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 HACD3Q9P035 362 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 DUSP13Q9UII6 198 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 PHTF1Q9UMS5 762 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 ZNF711Q9Y462 761 aa7.83□□□□□ -1.16
CTHRC1-203ENST00000520337 IQANK1A0A1B0GTG1 560 aa7.82□□□□□ -1.16
CTHRC1-203ENST00000520337 EDDM13A0A1B0GTR0 161 aa7.82□□□□□ -1.16
CTHRC1-203ENST00000520337 OR51F1A6NGY5 319 aa7.82□□□□□ -1.16
CTHRC1-203ENST00000520337 CAPN8A6NHC0 703 aa7.82□□□□□ -1.16
CTHRC1-203ENST00000520337 NPIPB15A6NHN6 443 aaPredicted RBP7.82□□□□□ -1.16
CTHRC1-203ENST00000520337 SHISA7A6NL88 538 aa7.82□□□□□ -1.16
CTHRC1-203ENST00000520337 TRIM49D1C9J1S8 452 aa7.82□□□□□ -1.16
CTHRC1-203ENST00000520337 SPECC1L-ADORA2AF8WAN1 911 aa7.82□□□□□ -1.16
CTHRC1-203ENST00000520337 K7EQS6 105 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms