RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 FER1L6-AS2Q96M78 137 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 NSMCE3Q96MG7 304 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 TEX101Q9BY14 249 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 WDR26Q9H7D7 661 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 KIAA1586Q9HCI6 787 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 DMRT3Q9NQL9 472 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 PDRG1Q9NUG6 133 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 SLC17A4Q9Y2C5 497 aa6.63□□□□□ -1.35
CTNNA1-216ENST00000519489 LILRA5A6NI73 299 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 E9PLN8 166 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 FAM229AH3BQW9 127 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 HTRA2O43464 458 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 F10P00742 488 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 CALCAP01258 141 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 APOEP02649 317 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 MYCLP1P12525 358 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 CFPP27918 469 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 ACVRL1P37023 503 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 CDH4P55283 916 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 UBE2IP63279 158 aaKnown RBP6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 HSF1Q00613 529 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 PDE1BQ01064 536 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 PCBP2Q15366 365 aaKnown RBP eCLIP6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 ZNF789Q5FWF6 425 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 FBXO38Q6PIJ6 1188 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 CEP128Q6ZU80 1094 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 TFAP2DQ7Z6R9 452 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 TMTC1Q8IUR5 882 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 CCDC71Q8IV32 467 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 C3orf20Q8ND61 904 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 OR2AP1Q8NGE2 309 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 TAS1R2Q8TE23 839 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 COG1Q8WTW3 980 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 SLC35F5Q8WV83 523 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 IRGQQ8WZA9 623 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 EEF2KMTQ96G04 330 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 ZNF514Q96K75 400 aaPredicted RBP6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 LRFN5Q96NI6 719 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 PPP1R9BQ96SB3 815 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 VKORC1Q9BQB6 163 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 SPON2Q9BUD6 331 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 ADAM19Q9H013 955 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 CYP3A43Q9HB55 503 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 SLC6A20Q9NP91 592 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 MPP6Q9NZW5 540 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 DMGDHQ9UI17 866 aaKnown RBP6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 PPT2Q9UMR5 302 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 RNF6Q9Y252 685 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 TMEM98Q9Y2Y6 226 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 PRKAB1Q9Y478 270 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 SEC16AO15027 2179 aa6.62□□□□□ -1.35
CTNNA1-216ENST00000519489 PCLOQ9Y6V0 5065 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 VWFP04275 2813 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 A0A087X1B8 175 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 TSPAN11A1L157 253 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 UBXN7O94888 489 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 PIGNO95427 931 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 TRUB2O95900 331 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 IVLP07476 585 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 P4HA1P13674 534 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 PVRP15151 417 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 GAP43P17677 238 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 TNFSF10P50591 281 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 CASP6P55212 293 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 BST2Q10589 180 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 CAPRIN1Q14444 709 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 TAF5Q15542 800 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 PYCR3Q53H96 274 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 AGAP7PQ5VUJ5 663 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 DOK6Q6PKX4 331 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 LIPIQ6XZB0 460 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 EPM2AIP1Q7L775 607 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 SYTL1Q8IYJ3 562 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 XXYLT1Q8NBI6 393 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 TFAP2BQ92481 460 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 ARHGEF2Q92974 986 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 HDAC10Q969S8 669 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 ISG20Q96AZ6 181 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 AGAP4Q96P64 663 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 OR2M4Q96R27 311 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 GSX2Q9BZM3 304 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 NIF3L1Q9GZT8 377 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 MIS12Q9H081 205 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 TPSG1Q9NRR2 321 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 CRIM1Q9NZV1 1036 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 ARMCX1Q9P291 453 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 CPNE7Q9UBL6 633 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 FBXL4Q9UKA2 621 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 DOCK10Q96BY6 2186 aa6.61□□□□□ -1.35
CTNNA1-216ENST00000519489 USF3Q68DE3 2245 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 A6NNC1 897 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 PAGE1O75459 146 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 POP4O95707 220 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 GSRP00390 522 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 SOD1P00441 154 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 RPN1P04843 607 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 EPB42P16452 691 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 CDK3Q00526 305 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 RBPJQ06330 500 aa6.6□□□□□ -1.35
CTNNA1-216ENST00000519489 MFAP5Q13361 173 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms