RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.22□□□□□ -0.93
HDAC3-215ENST00000519474 ZNF624Q9P2J8 865 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-215ENST00000519474 GUCA1BQ9UMX6 200 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 R3HDM2Q9Y2K5 976 aaKnown RBP9.22□□□□□ -0.93
HDAC3-215ENST00000519474 AAR2Q9Y312 384 aaKnown RBP9.22□□□□□ -0.93
HDAC3-215ENST00000519474 ASPMQ8IZT6 3477 aa9.22□□□□□ -0.93
HDAC3-215ENST00000519474 OR5K4A6NMS3 321 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 GPR89AB7ZAQ6 455 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 KMOO15229 486 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 NVLO15381 856 aaKnown RBP9.21□□□□□ -0.94
HDAC3-215ENST00000519474 KLK10O43240 276 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 ZW10O43264 779 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 POP7O75817 140 aaKnown RBP9.21□□□□□ -0.94
HDAC3-215ENST00000519474 METTL18O95568 372 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 SLC4A1P02730 911 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 ITGA2BP08514 1039 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 GPR89BP0CG08 455 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 F3P13726 295 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 LPOP22079 712 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-215ENST00000519474 MPSTP25325 297 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 PSMB4P28070 264 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 SPAM1P38567 509 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 PCBP4P57723 403 aaKnown RBP9.21□□□□□ -0.94
HDAC3-215ENST00000519474 XIAPP98170 497 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 HHEXQ03014 270 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 BIRC2Q13490 618 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 PRPSAP1Q14558 356 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 TAF1AQ15573 450 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-215ENST00000519474 PARP6Q2NL67 630 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 ZNF569Q5MCW4 686 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 ZDHHC20Q5W0Z9 365 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 KCTD11Q693B1 232 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 ITPRIPL1Q6GPH6 555 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 ABRAXAS1Q6UWZ7 409 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 GLT6D1Q7Z4J2 308 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 CDKL3Q8IVW4 592 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-215ENST00000519474 UBL4BQ8N7F7 174 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 RASGEF1AQ8N9B8 481 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 TTC13Q8NBP0 860 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 OR4D9Q8NGE8 314 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 KCNE4Q8WWG9 221 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 USP7Q93009 1102 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 TMEM159Q96B96 161 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 SPATA13Q96N96 652 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 BBC3Q96PG8 261 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-215ENST00000519474 SLC38A3Q99624 504 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 CMKLR1Q99788 373 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 RRAGDQ9NQL2 400 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-215ENST00000519474 IGSF5Q9NSI5 407 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 KCNK4Q9NYG8 393 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 TMEM9Q9P0T7 183 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 LOXL2Q9Y4K0 774 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 PCDHGA7Q9Y5G6 932 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 ARL5AQ9Y689 179 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 DNMT3AQ9Y6K1 912 aaPredicted RBP9.21□□□□□ -0.94
HDAC3-215ENST00000519474 CAPN6Q9Y6Q1 641 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 DMXL2Q8TDJ6 3036 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 CEP295Q9C0D2 2601 aa9.21□□□□□ -0.94
HDAC3-215ENST00000519474 KIR2DS5A0A0G2JLQ3 304 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 PRAMEF33A0A0G2JMD5 474 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 A0A0G2JNG1 304 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 GLYATL1P3A0A0U1RQE8 302 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 AGAP14A8MT82 685 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 KIR2DS3K7RE56 304 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 STX7O15400 261 aaKnown RBP9.2□□□□□ -0.94
HDAC3-215ENST00000519474 GPR39O43194 453 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 PPFIA2O75334 1257 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 JMJD7P0C870 316 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 FGF3P11487 239 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-215ENST00000519474 BRAFP15056 766 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 TNNT3P45378 269 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-215ENST00000519474 ARSDP51689 593 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 CTSCP53634 463 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 GDF10P55107 478 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 UBE2IP63279 158 aaKnown RBP9.2□□□□□ -0.94
HDAC3-215ENST00000519474 GPLD1P80108 840 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 CLN3Q13286 438 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 NFATC2Q13469 925 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 TRA2AQ13595 282 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDAC3-215ENST00000519474 KIR2DS5Q14953 304 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 CLCA4Q14CN2 919 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 TGIF1Q15583 401 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 HSP90B2PQ58FF3 399 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 PHF19Q5T6S3 580 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 TMEM220Q6QAJ8 160 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 CRTC3Q6UUV7 619 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 FAM151BQ6UXP7 276 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 WASH2PQ6VEQ5 465 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 ARHGAP22Q7Z5H3 698 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 SLC9B2Q86UD5 537 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 LRRTM4Q86VH4 590 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 PHYKPLQ8IUZ5 450 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 TXLNBQ8N3L3 684 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 FAM71DQ8N9W8 422 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 RCBTB1Q8NDN9 531 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 OR4K2Q8NGD2 314 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 NCSTNQ92542 709 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 SH3KBP1Q96B97 665 aa9.2□□□□□ -0.94
HDAC3-215ENST00000519474 CCDC97Q96F63 343 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-215ENST00000519474 FERMT1Q9BQL6 677 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms