RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 PRDM4Q9UKN5 801 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 SUFUQ9UMX1 484 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 SNX24Q9Y343 169 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 UTP11Q9Y3A2 253 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 C2CD2Q9Y426 696 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 NME7Q9Y5B8 376 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 GRIN2DO15399 1336 aa4.91□□□□□ -1.62
CTNNA1-212ENST00000518919 MGAMO43451 1857 aa4.9□□□□□ -1.62
CTNNA1-212ENST00000518919 TBC1D3DA0A087WVF3 549 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 TBC1D3IA0A087WXS9 549 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 TBC1D3EA0A087X179 549 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 TBC1D3KA0A087X1G2 549 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 A0A1B0GUA9 196 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 GAGE12BA1L429 117 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 A1L4Q6 167 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 GAGE12HA6NDE8 117 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 TBC1D3BA6NDS4 549 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 TBC1D3FA6NER0 549 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 ERICH4A6NGS2 130 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 A8MVJ9 347 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 GRXCR1A8MXD5 290 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 TBC1D3LB9A6J9 549 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 F8VP50 259 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 PI4K2BG5E9Z4 385 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 M0QYV0 167 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 NKX2-8O15522 239 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 GUCY1B2O75343 617 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 ERLIN2O94905 339 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 KRT14P02533 472 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 KRT19P08727 400 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 PAEPP09466 180 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 TBC1D3HP0C7X1 549 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 RALAP11233 206 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 ALADP13716 330 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 DARSP14868 501 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 GRK5P34947 590 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 LIPAP38571 399 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 PNPLA4P41247 253 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 KCNJ1P48048 391 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 PCP4P48539 62 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 NDST1P52848 882 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 ARF3P61204 181 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 ARF1P84077 181 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 SLC25A11Q02978 314 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 PTK6Q13882 451 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 KYAT1Q16773 422 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 UBXN11Q5T124 520 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 LRRC38Q5VT99 294 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 FAM205BPQ63HN1 556 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 TBC1D3GQ6DHY5 549 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 TBC1D3CQ6IPX1 549 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 GRHL2Q6ISB3 625 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 OGFOD2Q6N063 350 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 TRNP1Q6NT89 227 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 ARMC6Q6NXE6 501 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 RHBDF2Q6PJF5 856 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 CCDC137Q6PK04 289 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 GLB1LQ6UWU2 654 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 C17orf99Q6UX52 265 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 MFSD7Q6UXD7 560 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 DPY19L3Q6ZPD9 716 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 MAVSQ7Z434 540 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 TBC1D3Q8IZP1 549 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 GALNT4Q8N4A0 578 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 ARFGAP1Q8N6T3 406 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 PTGR2Q8N8N7 351 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 TRPV1Q8NER1 839 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 ZMIZ2Q8NF64 920 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 FAM76AQ8TAV0 307 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 FBXO25Q8TCJ0 367 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 NPIPB3Q92617 1050 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 LRRC45Q96CN5 670 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 WDYHV1Q96HA8 205 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 APOPT1Q96IL0 206 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 RUNDC3BQ96NL0 473 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 SLITRK1Q96PX8 696 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 CPXM1Q96SM3 734 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 RUFY1Q96T51 708 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 FMO2Q99518 471 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 FAM118BQ9BPY3 351 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 OSBPL8Q9BZF1 889 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 LHX5Q9H2C1 402 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 NXF3Q9H4D5 531 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 PRDM13Q9H4Q3 707 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 STN1Q9H668 368 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 SYNPO2LQ9H987 977 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 TMBIM4Q9HC24 238 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 MRPL47Q9HD33 250 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 AKIP1Q9NQ31 210 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 PARVAQ9NVD7 372 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 RASAL2Q9UJF2 1139 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 ITGA11Q9UKX5 1188 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 MTUS1Q9ULD2 1270 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 GPR34Q9UPC5 381 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 RCE1Q9Y256 329 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 PASKQ96RG2 1323 aa4.9□□□□□ -1.63
CTNNA1-212ENST00000518919 EVPLQ92817 2033 aa4.89□□□□□ -1.63
CTNNA1-212ENST00000518919 hCG_1818297A0A087WSY0 165 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms