RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	CCDC173	Q0VFZ6	552 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	CHRNA6	Q15825	494 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	ZNF648	Q5T619	568 aa	Predicted RBP	23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	CLEC14A	Q86T13	490 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	LINC00523	Q86TU6	105 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	SLITRK4	Q8IW52	837 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	TRIM48	Q8IWZ4	208 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	DDHD1	Q8NEL9	900 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	OR4D9	Q8NGE8	314 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	ZNF398	Q8TD17	642 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	MAIP1	Q8WWC4	291 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	APOL2	Q9BQE5	337 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	TMEM121	Q9BTD3	319 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	LZTFL1	Q9NQ48	299 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	PCDHGA7	Q9Y5G6	932 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	ARL5A	Q9Y689	179 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	COL27A1	Q8IZC6	1860 aa	Predicted RBP	23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	TRBV23OR9-2	A0A075B6M9	112 aa		23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	PDZK1P1	A8MUH7	402 aa		23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	MTX2	O75431	263 aa		23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	PRAMEF1	O95521	474 aa		23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	RALB	P11234	206 aa		23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	MSH3	P20585	1137 aa		23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	AKT1	P31749	480 aa		23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	LONRF2	Q1L5Z9	754 aa		23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	MEI1	Q5TIA1	1274 aa		23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	TMEM164	Q5U3C3	297 aa		23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	USP53	Q70EK8	1073 aa		23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	KLHDC8B	Q8IXV7	354 aa		23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	OR4K2	Q8NGD2	314 aa		23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	ULK4	Q96C45	1275 aa		23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	RDH14	Q9HBH5	336 aa		23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	CPNE7	Q9UBL6	633 aa		23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	23.83	■■□□□ 1.41
CNOT7-204	ENST00000518885		A6NCN8	305 aa		23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	ERI2	A8K979	691 aa	Known RBP	23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	CDRT15L2	A8MXV6	281 aa		23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	CASC3	O15234	703 aa	Known RBP	23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	BUD23	O43709	281 aa	Known RBP	23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	HAL	P42357	657 aa		23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	NFATC2	Q13469	925 aa		23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	PLA2G4E	Q3MJ16	856 aa		23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	SLC13A5	Q86YT5	568 aa	Predicted RBP	23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	JAML	Q86YT9	394 aa		23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	RBM12B	Q8IXT5	1001 aa	Known RBP	23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	HEXDC	Q8WVB3	486 aa		23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	RTP4	Q96DX8	246 aa		23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	PRR11	Q96HE9	360 aa	Predicted RBP	23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	UCK1	Q9HA47	277 aa		23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	ZNF148	Q9UQR1	794 aa		23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	R3HDM2	Q9Y2K5	976 aa	Known RBP	23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	URB1	O60287	2271 aa	Known RBP	23.82	■■□□□ 1.4
CNOT7-204	ENST00000518885	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885		A0A1W2PNU3	283 aa	Predicted RBP	23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	LIAS	O43766	372 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	SRP72	O76094	671 aa	Known RBP	23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	VIP	P01282	170 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	XRCC1	P18887	633 aa	Predicted RBP	23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	LIMK2	P53671	638 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	LAMB3	Q13751	1172 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	GPRC6A	Q5T6X5	926 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	AGAP9	Q5VTM2	703 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	TMEM71	Q6P5X7	295 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	WDR74	Q6RFH5	385 aa	Predicted RBP	23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	WASH2P	Q6VEQ5	465 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	PDZD3	Q86UT5	571 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	AMZ2	Q86W34	360 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	DCUN1D1	Q96GG9	259 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	NUDT22	Q9BRQ3	303 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	B3GNT4	Q9C0J1	378 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	SEMA6C	Q9H3T2	930 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	ASB8	Q9H765	288 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	WASH6P	Q9NQA3	447 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	PRDM8	Q9NQV8	689 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	PISD	Q9UG56	409 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	DNAJC16	Q9Y2G8	782 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	ZKSCAN5	Q9Y2L8	839 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	SCN8A	Q9UQD0	1980 aa		23.81	■■□□□ 1.4
CNOT7-204	ENST00000518885	CFAP99	D6REC4	459 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	UGT1A9	O60656	530 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	AP2A1	O95782	977 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	EML2	O95834	649 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	UGT1A6	P19224	532 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	ITGAL	P20701	1170 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	UGT1A1	P22309	533 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	UGT1A4	P22310	534 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	UGT1A3	P35503	534 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	LMAN1	P49257	510 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	SPACA3	Q8IXA5	215 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	CCDC89	Q8N998	374 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	AGBL5	Q8NDL9	886 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	UGT1A7	Q9HAW7	530 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	UGT1A10	Q9HAW8	530 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	UGT1A8	Q9HAW9	530 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	POT1	Q9NUX5	634 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	CRLS1	Q9UJA2	301 aa		23.8	■■□□□ 1.4
CNOT7-204	ENST00000518885	TMPRSS11E	Q9UL52	423 aa		23.8	■■□□□ 1.4

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms