RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 SLC25A14O95258 325 aaPredicted RBP7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TRIM16O95361 564 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TGDSO95455 350 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 DNTTP04053 509 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SBK3P0C264 359 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SRFP11831 508 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ATP1B2P14415 290 aaPredicted RBP7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 GM2AP17900 193 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ITGB6P18564 788 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 MSH3P20585 1137 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 DGKAP23743 735 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 DRD3P35462 400 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 RGS4P49798 205 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 CLCN7P51798 805 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 COPAP53621 1224 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 DNAJB13P59910 316 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ABCE1P61221 599 aaKnown RBP7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 RPS14P62263 151 aaKnown RBP7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 B4GALNT1Q00973 533 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 OCRLQ01968 901 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 CREB5Q02930 508 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SF3A3Q12874 501 aaKnown RBP eCLIP7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 OVGP1Q12889 678 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TDGQ13569 410 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 PUS10Q3MIT2 529 aaKnown RBP7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TTLL9Q3SXZ7 439 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 FBXO43Q4G163 708 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 LDLRAP1Q5SW96 308 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 AGBL4Q5VU57 503 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 KIAA1211LQ6NV74 962 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 GPR153Q6NV75 609 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SPATS2Q86XZ4 545 aaKnown RBP7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SLC22A9Q8IVM8 553 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SPNS2Q8IVW8 549 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 CPNE9Q8IYJ1 553 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 AADATQ8N5Z0 425 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ZBTB2Q8N680 514 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 IL17RCQ8NAC3 791 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TXNDC5Q8NBS9 432 aaKnown RBP7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 DDHD1Q8NEL9 900 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 OR6Y1Q8NGX8 325 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 GIMAP7Q8NHV1 300 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 RHEBL1Q8TAI7 183 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 STAG3L4Q8TBR4 150 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 GANCQ8TET4 914 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 BTN2A2Q8WVV5 523 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 FAM3CQ92520 227 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 GLYATL1Q969I3 302 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 PTERQ96BW5 349 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 CCDC97Q96F63 343 aaPredicted RBP7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 LINGO1Q96FE5 620 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 PDLIM5Q96HC4 596 aaKnown RBP7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 GUCD1Q96NT3 240 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SLC30A3Q99726 388 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 PLCD4Q9BRC7 762 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 GATA5Q9BWX5 397 aaPredicted RBP7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TRIM55Q9BYV6 548 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 NPHS2Q9NP85 383 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SLC2A4RGQ9NR83 387 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SPATS2LQ9NUQ6 558 aaKnown RBP7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 KCTD5Q9NXV2 234 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 KLHL14Q9P2G3 628 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TMPRSS11EQ9UL52 423 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ARL2BPQ9Y2Y0 163 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 COQ6Q9Y2Z9 468 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 DOCK9Q9BZ29 2069 aa7.55□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SPTBN5Q9NRC6 3674 aaKnown RBP7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 EYSQ5T1H1 3165 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 A0A1W2PP55 124 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 NEMP2A6NFY4 417 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SYCE1LA8MT33 242 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 A8MT66 165 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 QSOX1O00391 747 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 BTN3A1O00481 513 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 MAN2B1O00754 1011 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 KPNA5O15131 536 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ITM2AO43736 263 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 KERAO60938 352 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 ADAM23O75077 832 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 LYPLA1O75608 230 aaPredicted RBP7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 RNASEH2AO75792 299 aaKnown RBP7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TM7SF2O76062 418 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 IPO13O94829 963 aaKnown RBP7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 AP2A2O94973 939 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 PCDH8O95206 1070 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 HSPA4LO95757 839 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TPBGLP0DKB5 382 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 COL9A1P20849 921 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 GPR1P46091 355 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 NAGLUP54802 743 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 DPTQ07507 201 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SFSWAPQ12872 951 aaKnown RBP7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 OR4D1Q15615 310 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TSNQ15631 228 aaKnown RBP7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 CRY1Q16526 586 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 TTC31Q49AM3 519 aaPredicted RBP7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 HSF5Q4G112 596 aaPredicted RBP7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 SLC44A4Q53GD3 710 aa7.54□□□□□ -1.2
SCARNA20.1-201ENST00000516009 CFAP157Q5JU67 520 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms