RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 PAFAH1B3Q15102 231 aaKnown RBP6.12□□□□□ -1.43
ATP2C1-222ENST00000514654 HLA-DQA1Q5Y7H0 255 aa6.12□□□□□ -1.43
ATP2C1-222ENST00000514654 GTF2H2CQ6P1K8 395 aa6.12□□□□□ -1.43
ATP2C1-222ENST00000514654 RORBQ92753 470 aa6.12□□□□□ -1.43
ATP2C1-222ENST00000514654 REXO5Q96IC2 774 aaKnown RBP6.12□□□□□ -1.43
ATP2C1-222ENST00000514654 SH3GL3Q99963 347 aa6.12□□□□□ -1.43
ATP2C1-222ENST00000514654 MCMBPQ9BTE3 642 aa6.12□□□□□ -1.43
ATP2C1-222ENST00000514654 SSU72Q9NP77 194 aaKnown RBP6.12□□□□□ -1.43
ATP2C1-222ENST00000514654 PHPT1Q9NRX4 125 aaPredicted RBP6.12□□□□□ -1.43
ATP2C1-222ENST00000514654 TAS2R1Q9NYW7 299 aa6.12□□□□□ -1.43
ATP2C1-222ENST00000514654 CLIC5Q9NZA1 410 aa6.12□□□□□ -1.43
ATP2C1-222ENST00000514654 NDRG2Q9UN36 371 aaKnown RBP6.12□□□□□ -1.43
ATP2C1-222ENST00000514654 MYH11P35749 1972 aa6.12□□□□□ -1.43
ATP2C1-222ENST00000514654 ALS2Q96Q42 1657 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 DNAJC25-GNG10A0A024R161 153 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 FAM159BA6NKW6 160 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 ZW10O43264 779 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 CLDN7O95471 211 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 CLDN9O95484 217 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 ESR1P03372 595 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 SLC10A3P09131 477 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 HAPLN1P10915 354 aaPredicted RBP6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 UMPSP11172 480 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 CSF2RAP15509 400 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 GGT5P36269 586 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 FPGSQ05932 587 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 GPAT3Q53EU6 434 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 ARSIQ5FYB1 569 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 SNAP47Q5SQN1 464 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 CPTPQ5TA50 214 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 CHMP1BQ7LBR1 199 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 CAND1Q86VP6 1230 aaKnown RBP6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 CDK20Q8IZL9 346 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 CPA6Q8N4T0 437 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 PPCDCQ96CD2 204 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 MPP4Q96JB8 637 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 PTPN18Q99952 460 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 APOL4Q9BPW4 351 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 RSPH9Q9H1X1 276 aaPredicted RBP6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 ARMC7Q9H6L4 198 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 VRTNQ9H8Y1 702 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 DNAJC28Q9NX36 388 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 KLHL3Q9UH77 587 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 RAB23Q9ULC3 237 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 CNOT6Q9ULM6 557 aaKnown RBP6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 PRPF19Q9UMS4 504 aaKnown RBP6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 ILVBLA1L0T0 632 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 SNTNA6NMZ2 147 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 H0YGN5 161 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 INPPL1O15357 1258 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 GUCY1B2O75343 617 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 TCEA3O75764 348 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 FGF19O95750 216 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 ITGB1P05556 798 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 NCK1P16333 377 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 ZNF37AP17032 561 aaPredicted RBP6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 PAX7P23759 505 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 GMPRP36959 345 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 AFF1P51825 1210 aaKnown RBP6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 NEK2P51955 445 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 LSM3P62310 102 aaKnown RBP6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 GPM6BQ13491 265 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 LACTB2Q53H82 288 aaPredicted RBP6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 MBLAC2Q68D91 279 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 GLYATQ6IB77 296 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 CNKSR3Q6P9H4 555 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 PAGE2Q7Z2X7 111 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 ZC3HC1Q86WB0 502 aaKnown RBP6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 KRT73Q86Y46 540 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 OFCC1Q8IZS5 231 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 PQLC1Q8N2U9 271 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 KBTBD7Q8WVZ9 684 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 TCF12Q99081 682 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 MTERF1Q99551 399 aaKnown RBP6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 FAIM2Q9BWQ8 316 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 OR2AG1Q9H205 316 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 TMEM245Q9H330 911 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 SUV39H2Q9H5I1 410 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 EQTNQ9NQ60 294 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 OSER1Q9NX31 292 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 RHBDL2Q9NX52 303 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 ADGRE2Q9UHX3 823 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 SAMHD1Q9Y3Z3 626 aaKnown RBP6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 NFS1Q9Y697 457 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 FGF18O76093 207 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 ATP6V1C1P21283 382 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 TLX1P31314 330 aaPredicted RBP6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 KIR3DL1P43629 444 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 CCR10P46092 362 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 MANFP55145 182 aaKnown RBP6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 MRPS15P82914 257 aaKnown RBP6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 ECT2LQ008S8 904 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 FOLH1Q04609 750 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 TNK2Q07912 1038 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 ZNF252P-AS1Q0IIN9 211 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 ELP6Q0PNE2 266 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 MPP2Q14168 576 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 CHRNA6Q15825 494 aa6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 INTS11Q5TA45 600 aaKnown RBP6.11□□□□□ -1.43
ATP2C1-222ENST00000514654 METTL21CQ5VZV1 264 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms